Job Description P75769 Confidence 1.91% Date Thu Jan 5 12:13:57 GMT 2012 Rank 35 Aligned Residues 94 % Identity 17% Template c3rkoK_ PDB info PDB header:oxidoreductase Chain: K: PDB Molecule:nadh-quinone oxidoreductase subunit k; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	V	F	S	T	A	G	A	M	F	L	I	S	M	L	A	G	L	L	F	N	V	D	P	G	S	H	R	F	I	I	M	M	T	L	T	G	L	A	L	V	I	I	V	N	A	A	L	M	S	E	R	P	I	W	I	I	S	C	L	M	I	V	L	W	S	G	I	I	S	H	G	R	N	K	L	L	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	H	G	L	I	L	A	A	I	L	F	V	L	G	L	T	G	L	V	I	R	R	N	L	L	F	M	L	I	G	L	E	I	M	I	N	A	S	A	L	A	F	V	V	A	G	S	Y	W	G	Q	T	D	G	Q	V	M	Y	I	L	A	I	S	L	A	A	A	E	A	S	I	G	L	A	L	L	L	Q	L
Template Known Secondary structure																									B																										T	T		S																											T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	K	C	H	S	E	E	L	W	S	P	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	R	R	R	Q	N	L	N	I	D	S	V	S	E
Template Known Secondary structure		T	T	T		S	S		B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions