Job Description P76584 Confidence 100.00% Date Thu Jan 5 12:24:51 GMT 2012 Rank 13 Aligned Residues 258 % Identity 19% Template c3k25B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:slr1438 protein; PDBTitle: crystal structure of slr1438 protein from synechocystis sp. pcc 6803,2 northeast structural genomics consortium target sgr112 Resolution 2.55 Å

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		4	.	.	.	.	.	10			.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure									.	.								.																		.	.	.	.
Query SS confidence									.	.								.																		.	.	.	.
Query Sequence		Y	T	L	S	H	G	S	.	.	L	K	L	D	V	S	D	.	Q	G	G	V	I	E	G	F	W	R	D	T	T	P	L	L	R	.	.	.	.	P	G	K	K	S	G	V	A	T	D	A	S	C	F	P	L	V	P	F	A	N	R	V	S	G	N	R	F	V	W	Q	G	R	E	Y	Q	L	Q	P	N	V	E
Query Conservation									.	.								.																		.	.	.	.
Alig confidence									.	.								.																		.	.	.	.																																								.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		Y	H	L	E	D	D	Q	S	L	A	R	L	S	L	V	P	G	R	G	G	L	V	T	E	W	T	V	Q	G	Q	P	I	L	Y	F	D	R	E	R	F	Q	D	P	S	L	S	V	R	G	G	I	P	I	L	F	P	I	C	G	N	L	P	Q	D	Q	F	N	H	A	G	K	S	Y	R	L	K	Q	.	.	.
Template Known Secondary structure							T	T	T	T							T	T	S	S	S								T	T				B		B						T	S	T	T	S				B	S					B	S		S	S			G	G	G				S	S	S							T	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.									.	.	.	.	.
Query SS confidence																									.	.	.									.	.	.	.	.
Query Sequence		W	D	A	H	Y	L	H	G	D	G	W	L	G	E	W	Q	C	V	S	H	S	D	D	.	.	.	S	L	C	L	V	Y	E	H	.	.	.	.	.	R	S	G	V	Y	H	Y	R	V	S	Q	A	F	H	L	T	A	D	T	L	T	V	T	L	S	V	T	N	Q	G	A	E	T	L	P	F	G	T	G	W	H
Query Conservation																									.	.	.									.	.	.	.	.
Alig confidence		.	.	.	.	.	.																		.	.	.									.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	H	G	F	A	R	D	L	P	W	E	V	I	G	Q	Q	T	Q	D	N	A	R	L	D	L	R	L	S	H	N	D	A	T	L	E	A	F	P	F	A	F	E	L	V	F	S	Y	Q	L	Q	G	H	S	L	R	I	E	Q	R	I	A	N	L	G	D	Q	R	X	P	F	S	L	G	F	H
Template Known Secondary structure		.	.	.	.	.	.	T	B	S	T	T	T	S										S	S	S																	S		S												T	T												S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		P	Y	F	P	L	S	P	Q	T	R	I	Q	A	Q	A	S	G	Y	W	L	E	R	E	Q	W	L	A	G	E	F	C	E	Q	L	P	Q	E	L	D	F	N	Q	P	A	P	L	P	R	Q	W	V	N	N	G	F	A	.	G	W	N	G	Q	A	R	I	E	Q	P	Q	E	G	Y	A	I	I	M	E	T	T	P
Query Conservation																																																										.
Alig confidence																								.	.	.	.	.	.	.	.	.																										.
Template Conservation																								.	.	.	.	.	.	.	.	.
Template Sequence		P	Y	F	F	C	R	E	K	L	G	I	T	L	A	I	P	A	N	D	Y	L	D	.	.	.	.	.	.	.	.	.	Q	K	T	G	D	C	H	G	Y	D	G	Q	L	N	L	T	S	P	E	L	D	L	A	F	T	Q	I	S	Q	P	R	A	H	F	I	D	P	D	R	N	L	K	I	E	V	S	F	S	E
Template Known Secondary structure							S			T	T							B	S					.	.	.	.	.	.	.	.	.	T	T	T	T							S				T	T	S	S									B	S	S	S							T	T	T	T									T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.										.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	P	C	Y	F	I	F	V	S	D	P	A	F	D	K	G	Y	A	F	D	F	F	C	L	E	P	M	S	H	A	P	D	D	H	H	R	P	E	G	G	D	L	I	A	L	A	P	G	E	S	T	T	S	E	M	S	L	R	V	E
Query Conservation
Alig confidence											.	.	.	.	.	.	.																					.	.
Template Conservation											.	.	.	.	.	.	.																					.	.
Template Sequence		L	Y	Q	T	L	V	L	W	T	.	.	.	.	.	.	.	V	A	G	K	D	Y	L	C	L	E	P	W	S	G	P	R	N	A	L	N	.	.	S	G	E	Q	L	A	W	V	E	P	Y	S	S	R	S	A	W	V	N	F	Q	V	S
Template Known Secondary structure		T									.	.	.	.	.	.	.		S	S	S	S								S	S		T	T				.	.			T	T						T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.																					.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.								.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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