Job Description P76584 Confidence 100.00% Date Thu Jan 5 12:24:51 GMT 2012 Rank 7 Aligned Residues 280 % Identity 16% Template c3imhB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:galactose-1-epimerase; PDBTitle: crystal structure of galactose 1-epimerase from lactobacillus2 acidophilus ncfm Resolution 1.76 Å

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		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure												.																																			.	.	.
Query SS confidence												.																																			.	.	.
Query Sequence		M	T	I	Y	T	L	S	H	G	S	.	L	K	L	D	V	S	D	Q	G	G	V	I	E	G	F	W	R	D	T	T	P	L	L	R	P	G	K	K	S	G	V	A	T	D	.	.	.	A	S	C	F	P	L	V	P	F	A	N	R	V	S	G	N	R	F	V	W	Q	G	R	E	Y	Q	L	Q	P	N	V	E
Query Conservation												.																																			.	.	.
Alig confidence												.																																			.	.	.
Template Conservation
Template Sequence		L	C	E	I	T	L	E	N	D	A	G	M	A	V	K	V	L	N	Y	G	A	T	L	E	K	V	L	L	D	G	E	N	M	I	L	S	L	N	S	P	E	D	Y	S	K	E	R	N	F	L	G	G	T	V	G	R	I	A	G	R	V	R	A	G	Q	W	K	H	G	N	E	I	H	Q	L	P	L	N	D	G
Template Known Secondary structure										S	S	S							T	B	T	T								T	T				B				S	S	G	G	G	G	G	T	S				T	T					S	B		S			G	G	G					T	T									B	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure												.	.								.	.	.																	.	.	.	.
Query SS confidence												.	.								.	.	.																	.	.	.	.
Query Sequence		W	D	A	H	Y	L	H	G	D	G	.	.	W	L	G	E	W	Q	C	.	.	.	V	S	H	S	D	D	S	L	C	L	V	Y	E	H	R	S	.	.	.	.	G	V	Y	H	Y	R	V	S	Q	A	F	H	L	T	A	D	T	L	T	V	T	L	S	V	T	N	Q	G	A	E	T	L	P	F	G	T	G	W
Query Conservation												.	.								.	.	.																	.	.	.	.
Alig confidence		.	.									.	.								.	.	.																	.	.	.	.																		.
Template Conservation		.	.																																																										.
Template Sequence		.	.	D	N	H	I	H	G	G	I	G	T	D	M	H	V	W	D	F	R	P	S	C	D	S	E	H	A	R	V	D	L	T	L	F	D	P	D	G	N	N	D	Y	P	G	N	L	K	L	H	A	R	Y	E	L	D	N	E	N	.	N	L	H	Y	L	L	E	A	V	S	D	K	L	T	I	F	N	P	V	N
Template Known Secondary structure		.	.	T	B			T	T	S	S		G	G	G	S	B									S	S												T	T	G	G	G			S												T	T	S	.											S	S	S				B
Template Predicted Secondary structure		.	.																																																										.
Template SS confidence
				96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		148	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.													.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure										.	.	.																							.																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.																							.																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	P	Y	F	P	L	S	P	.	.	.	Q	T	R	I	Q	A	Q	A	S	G	Y	W	L	E	R	E	Q	W	L	A	G	E	.	F	C	E	Q	L	P	Q	E	L	D	F	N	Q	P	A	P	L	P	R	Q	W	.	.	.	.	.	.	.	.	.	.	.	.	V	N	N	G	F	A	G	W	N	G	Q	A	R
Query Conservation										.	.	.																							.																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.																							.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	T	Y	F	N	L	G	E	R	A	E	D	L	N	L	Q	M	N	A	D	Y	Y	L	P	V	D	E	A	G	L	P	D	R	G	M	A	E	V	A	G	T	A	F	D	F	R	K	T	K	R	I	G	D	A	L	N	S	D	D	S	Q	I	K	L	R	N	G	L	D	H	P	F	I	L	N	G	N	N	P	A
Template Known Secondary structure							T	T	S		G	G	G													B		T	T	S	S	B	S	S						T	T	S	T	T			S	S									T	S									T	S									S		S		S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.						.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		I	E	Q	P	Q	E	G	Y	A	I	I	M	E	T	T	P	P	A	P	C	Y	F	I	F	V	S	.	.	.	.	.	D	P	A	F	D	K	G	Y	A	F	D	F	F	C	L	E	P	M	S	H	A	P	D	D	H	H	R	P	E	G	G	D	L	I	A	L	A	P	G	E	S	T	T	S	E	M	S	L	R
Query Conservation																												.	.	.	.	.
Alig confidence																	.	.										.	.	.	.	.																					.						.	.	.
Template Conservation																	.	.																																			.						.	.	.
Template Sequence		A	L	L	S	S	N	K	H	R	L	I	V	K	T	N	.	.	A	P	A	L	V	L	Y	A	G	N	H	F	N	H	T	G	I	V	N	N	I	G	Q	Y	D	G	I	T	F	E	A	Q	C	P	.	P	A	E	G	N	.	.	.	D	L	G	Q	I	T	L	L	P	F	E	K	F	K	R	T	V	D	W	K
Template Known Secondary structure							S	S								S	.	.	S	S								T	T			S		G	G	G	T	T			T	T	S								S		.			S	S	S	.	.	.	B		G	G	G				T	T
Template Predicted Secondary structure																	.	.																																			.						.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		287	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		327	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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