Job Description P76584 Confidence 97.09% Date Thu Jan 5 12:24:51 GMT 2012 Rank 19 Aligned Residues 120 % Identity 16% Template c3bs6B_ PDB info PDB header:membrane protein, protein transport Chain: B: PDB Molecule:inner membrane protein oxaa; PDBTitle: 1.8 angstrom crystal structure of the periplasmic domain of2 the membrane insertase yidc Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.									.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.
Query Sequence		T	I	Y	T	L	S	H	G	S	L	K	L	D	V	S	D	Q	G	G	V	I	E	G	F	W	R	D	.	.	.	.	.	.	.	.	T	T	P	L	L	R	P	G	K	K	S	G	V	A	T	D	A	S	C	F	P	L	V	P	F	A	N	R	V	S	G	N	R	F	V	W	Q	G	R	E	Y	Q	L	Q	P
Query Conservation																													.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	I	S	V	K	T	D	V	L	D	L	T	I	N	T	R	G	G	D	V	E	Q	A	L	L	P	A	Y	P	K	E	L	N	S	T	Q	P	F	Q	L	L	E	T	S	P	Q	F	I	Y	Q	A	Q	S	G	L	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R
Template Known Secondary structure									S	S							T	B	T	T												S	S	T	T			S					S				T	T											S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																						.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.																											.	.
Query SS confidence																													.	.	.	.																											.	.
Query Sequence		N	V	E	W	D	A	H	Y	L	H	G	D	G	W	L	G	E	W	Q	C	V	S	H	S	D	D	S	.	.	.	.	L	C	L	V	Y	E	H	R	S	G	V	Y	H	Y	R	V	S	Q	A	F	H	L	T	A	D	T	.	.	L	T	V	T	L	S	V	T	N	Q	G	A	E	T	L	P	F	G	T
Query Conservation																													.	.	.	.																											.	.
Alig confidence																													.	.	.	.										.	.	.															.	.
Template Conservation																																										.	.	.
Template Sequence		D	G	P	D	N	P	A	N	G	P	R	P	L	Y	N	V	E	K	D	A	Y	V	L	A	E	G	Q	N	E	L	Q	V	P	X	T	Y	T	D	A	A	.	.	.	G	N	T	F	T	K	T	F	V	L	K	R	G	D	Y	A	V	N	V	N	Y	N	V	Q	N	A	G	E	K	P	L	E	I	S	S
Template Known Secondary structure		T		T	T	S	G	G	G	S	S			B		B		S		S						T	T		S											T	T	.	.	.												T	T														S	S	S
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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