Job Description P76584 Confidence 85.62% Date Thu Jan 5 12:24:51 GMT 2012 Rank 22 Aligned Residues 161 % Identity 9% Template c2xn1B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-galactosidase; PDBTitle: structure of alpha-galactosidase from lactobacillus acidophilus ncfm2 with tris Resolution 2.30 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.																																													.	.	.	.
Query SS confidence																																.	.																																													.	.	.	.
Query Sequence		S	H	S	D	D	S	L	C	L	V	Y	E	H	R	S	G	V	Y	H	Y	R	V	S	Q	A	F	H	L	T	A	.	.	D	T	L	T	V	T	L	S	V	T	N	Q	G	A	E	T	L	P	F	G	T	G	W	H	P	Y	F	P	L	S	P	Q	T	R	I	Q	A	Q	A	S	G	Y	W	L	.	.	.	.
Query Conservation																																.	.																																													.	.	.	.
Alig confidence																																.	.																																													.	.	.	.
Template Conservation
Template Sequence		K	E	D	D	E	A	Q	T	L	I	V	T	L	E	D	K	V	S	K	L	E	Y	D	L	L	Y	T	I	Y	R	D	R	P	V	I	V	R	S	V	Q	V	H	N	H	G	E	E	A	V	Y	L	E	K	V	A	S	M	Q	M	D	Y	V	D	K	D	F	E	V	I	T	L	P	G	A	H	A	N	E	R	R
Template Known Secondary structure		S	S	G	G	G											T	T	T	T											T	T	S	S												S	S	S															S	S											B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	E	Q	W	L	A	G	E	F	C	E	Q	L	P	Q	E	L	D	F	N	Q	P	A	P	L	P	R	Q	W	V	N	N	G	F	A	G	W	N	G	Q	A	R	I	E	Q	P	Q	E	G	Y	A	I	I	M	E	T	T	P	P	A	P	C	Y	F	I	F	V	S	D	P	A	F	D	K	G	Y	A	F	D
Query Conservation
Alig confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	R	E	N	I	G	Q	G	I	K	V	F	S	S	Y	R	G	T	S	S	H	Q	M	N	P	F	M	A	L	V	D	H	D	T	N	E	F	M	G	E	A	Y	G	F	A	L	A	Y	S	G	N	H	K	F	E	V	E	R	D	Q	F	G	Q	I	H	V	N	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S									S	S	S	S		S	S										T	T			S	S	S	B										S	S										T	T	S						.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	C	L	E	P	M	S	H	A	P	D	D	H	H	R	P	E	G	G	D	L	I	A	L	A	P	G	E	S	T	T
Query Conservation
Alig confidence		.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	T	G	I	N	D	Y	N	F	K	.	.	.	.	.	.	.	.	.	.	.	.	W	K	L	N	P	N	E	E	F	Q
Template Known Secondary structure		.						T	T			.	.	.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure		.										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			277	.	.	280	.	.	.	.	.													.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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