Job Description P76584 Confidence 4.68% Date Thu Jan 5 12:24:51 GMT 2012 Rank 90 Aligned Residues 134 % Identity 18% Template c2qsvA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein of unknown function from porphyromonas2 gingivalis w83 Resolution 2.10 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	T	L	T	V	T	L	S	V	T	N	Q	G	A	E	T	L	P	F	G	T	G	W	H	P	Y	F	P	L	S	P	Q	T	R	I	Q	A	Q	A	S	G	Y	W	L	E	R	E	Q	W	L	A	G	E	F	C	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	E	G	V	V	R	L	V	V	N	N	T	D	E	S	D	L	Q	V	A	V	V	S	L	P	S	F	V	S	L	D	D	R	A	F	R	L	Q	A	R	E	P	R	E	L	N	L	S	L	A	V	P	R	N	X	P	P	G	X	K	D	E	P	L	V	L	E	V	T	S	P	E	T	G	K	K	A	V	D
Template Known Secondary structure		T													S	S	S											T	T				S								S	S	S												T	T			S														T	T	T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
											181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	Q	L	P	Q	E	L	D	F	N	Q	P	A	P	L	P	R	Q	W	V	N	N	G	F	A	G	W	N	G	Q	A	R	I	E	Q	P	Q	E	G	Y	A	I	I	M	E	T	T	P	P	A	P	C	Y	F	I	F	V	S	D	P	A	F	D	K	G	Y	A	F	D	F	F	C
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Sequence		S	V	X	V	S	L	P	L	V	D	N	F	P	A	L	T	A	A	Q	T	G	V	X	E	L	S	T	Y	L	D	X	G	Q	L	D	G	E	T	T	.	.	.	.	.	.	.	K	A	A	I	E	I	R	N	V	G	A	G	P	L	R	L	H	S	V	.	.	.	.	.	.	.	T	T	R	N	P	A	L	T
Template Known Secondary structure													G	G	G			G	G	G																T	T	S			.	.	.	.	.	.	.										S	S	S								.	.	.	.	.	.	.				S	T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.								.	.	.	.	160	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	P	M	S	H	A	P	D	D	H	H	R	P	E	G	G	D	L	I	A	L	A	P	G	E	S	T	T	S	E	M	S	L
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	P	D	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	K	P	G	G	S	T	L	L	R	I	A	V
Template Known Secondary structure					S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.															170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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