Job Description P76584 Confidence 100.00% Date Thu Jan 5 12:24:51 GMT 2012 Rank 4 Aligned Residues 283 % Identity 15% Template c1ygaA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:hypothetical 37.9 kda protein in bio3-hxt17 PDBTitle: crystal structure of saccharomyces cerevisiae yn9a protein,2 new york structural genomics consortium Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure											.																																			.	.	.
Query SS confidence											.																																			.	.	.
Query Sequence		T	I	Y	T	L	S	H	G	S	.	L	K	L	D	V	S	D	Q	G	G	V	I	E	G	F	W	R	D	T	T	P	L	L	R	P	G	K	K	S	G	V	A	T	D	.	.	.	A	S	C	F	P	L	V	P	F	A	N	R	V	S	G	N	R	F	V	W	Q	G	R	E	Y	Q	L	Q	P	N	V	E	W
Query Conservation											.																																			.	.	.
Alig confidence											.																																			.	.	.
Template Conservation
Template Sequence		G	V	I	T	I	G	D	E	K	K	F	Q	A	T	I	A	P	L	G	A	T	L	V	D	L	K	V	N	G	Q	S	V	V	Q	G	Y	S	N	V	Q	D	Y	L	T	D	G	N	M	M	G	A	T	V	G	R	Y	A	N	R	I	A	K	G	V	F	S	L	D	D	G	P	H	K	L	T	V	N	N	C	G
Template Known Secondary structure									T	T	T							T	B	T	T								T	T				B				S	S	G	G	G	G	T	T		S	S		T	T					S	B		S			G	G	G					T	T									B	T	T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		78	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure							.	.																			.	.	.	.	.										.	.	.	.	.	.	.															.	.
Query SS confidence							.	.																			.	.	.	.	.										.	.	.	.	.	.	.															.	.
Query Sequence		D	A	H	Y	L	.	.	H	G	D	G	W	L	G	E	W	Q	C	V	S	H	S	D	D	S	.	.	.	.	.	L	C	L	V	Y	E	H	R	S	.	.	.	.	.	.	.	G	V	Y	H	Y	R	V	S	Q	A	F	H	L	T	.	.	A	D	T	L	T	V	T	L	S	V	T	N	Q	G	A	E	T	L
Query Conservation							.	.																			.	.	.	.	.										.	.	.	.	.	.	.															.	.
Alig confidence							.	.						.													.	.	.	.	.										.	.	.	.	.	.	.															.	.
Template Conservation														.
Template Sequence		N	T	N	H	S	S	I	S	S	L	N	L	.	K	Q	Y	K	A	S	P	V	E	N	P	S	K	G	V	Y	V	V	E	F	K	L	L	D	D	H	T	Q	P	N	P	N	E	F	P	G	D	L	E	V	T	V	K	Y	T	L	N	V	A	E	M	T	L	D	M	E	Y	Q	A	Q	L	V	R	G	D	A	T
Template Known Secondary structure		B			T	T	G	G	G		G	G	G	.	S	B											T	T												S	S	S	S	S				S	S	S												T	T	T	T													S	S
Template Predicted Secondary structure														.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.									.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.																	.							.																						.	.
Query SS confidence																.	.	.	.	.	.	.	.																	.							.																						.	.
Query Sequence		P	F	G	T	G	W	H	P	Y	F	P	L	S	P	.	.	.	.	.	.	.	.	Q	T	R	I	Q	A	Q	A	S	G	Y	W	L	E	R	E	.	Q	W	L	A	G	E	.	F	C	E	Q	L	P	Q	E	L	D	F	N	Q	P	A	P	L	P	R	Q	W	.	.	V	N	N	G	F	A	G	W	N	G	Q
Query Conservation																.	.	.	.	.	.	.	.																	.							.																						.	.
Alig confidence																.	.	.	.	.	.	.	.																	.							.																						.	.
Template Conservation
Template Sequence		P	I	N	M	T	N	H	S	Y	F	N	L	N	K	V	K	S	E	K	S	I	R	G	T	E	V	K	V	C	S	N	K	S	L	E	V	T	E	G	A	L	L	P	T	G	K	I	I	E	R	N	I	A	T	F	D	S	T	K	P	T	V	L	H	E	D	T	P	V	F	D	C	T	F	I	I	D	A	N	K
Template Known Secondary structure				B							B		T	T	T	T	T		T	T			T	T						S									T	T	T											S			B	T	T		S	S						S	S											T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
																		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	I	E	Q	P	Q	E	G	Y	A	I	I	M	E	T	T	P	P	A	P	C	Y	F	I	F	V	S	D	P	A	F	D	K	G	Y	A	F	D	F	F	C	L	E	P	M	S	H	A	P	D	D	H	H	R	P	E	G	G	D	L	I	A	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.																															.
Template Conservation																																		.	.																															.
Template Sequence		D	L	K	T	T	D	S	V	S	V	N	K	L	V	P	V	F	K	A	Y	H	P	E	S	H	I	K	F	E	V	S	T	.	.	T	E	P	T	V	H	L	Y	T	G	D	N	L	C	G	K	F	V	P	R	S	G	F	A	V	Q	Q	G	R	Y	.	V	D	A	I	N	R	D	E	W	R	G	C	V	L	L
Template Known Secondary structure		T			S	S	B		T	T	T	S											T	T	T									.	.	S	S	S								T	T			T	T	S		T	T	S		B						S		.	S	S	G	G	G						G	G	G
Template Predicted Secondary structure																																		.	.																															.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	G	E	S	T	T	S	E	M	S	L	R	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	G	E	V	Y	T	S	K	T	Q	Y	K	F	D
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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