Job Description P76584 Confidence 36.93% Date Thu Jan 5 12:24:51 GMT 2012 Rank 40 Aligned Residues 166 % Identity 10% Template c1k1yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:4-alpha-glucanotransferase; PDBTitle: crystal structure of thermococcus litoralis 4-alpha-glucanotransferase2 complexed with acarbose Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																.																																																													.	.	.	.	.
Query SS confidence																.																																																													.	.	.	.	.
Query Sequence		Y	T	L	S	H	G	S	L	K	L	D	V	S	D	.	Q	G	G	V	I	E	G	F	W	R	D	T	T	P	L	L	R	P	G	K	K	S	G	V	A	T	D	A	S	C	F	P	L	V	P	F	A	N	R	V	S	G	N	R	F	V	W	Q	G	R	E	Y	Q	L	Q	P	N	V	E	W	.	.	.	.	.
Query Conservation																.																																																													.	.	.	.	.
Alig confidence																.																																																													.	.	.	.	.
Template Conservation
Template Sequence		I	M	V	E	N	D	G	F	I	A	T	I	K	P	H	Y	G	G	S	I	F	E	L	S	S	K	R	K	A	V	N	Y	N	D	V	L	P	R	R	W	E	H	Y	H	E	Q	I	P	E	E	I	R	R	E	L	A	Y	D	W	Q	L	R	A	I	L	Q	D	H	F	I	K	P	E	E	T	L	D	N	Y	R
Template Known Secondary structure							S	S							T	T	T	T	T								T	T	T	T			T	T									T	T										T	T					S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
				78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.																																					.	.	.
Query SS confidence		.	.																																					.	.	.
Query Sequence		.	.	D	A	H	Y	L	H	G	D	G	W	L	G	E	W	Q	C	V	S	H	S	D	D	S	L	C	L	V	Y	E	H	R	S	G	V	Y	H	.	.	.	Y	R	V	S	Q	A	F	H	L	T	A	D	T	L	T	V	T	L	S	V	T	N	Q	G	A	E	T	L	P	F	G	T	G	W	H	P	Y	F	P
Query Conservation		.	.																																					.	.	.
Alig confidence		.	.										.							.																				.	.	.
Template Conservation													.							.
Template Sequence		L	V	K	Y	H	E	L	G	D	F	V	.	N	Q	P	Y	E	Y	.	E	M	I	E	N	G	V	K	L	W	R	E	G	G	V	Y	A	E	E	K	I	P	A	R	V	E	K	K	I	E	L	T	E	D	G	F	I	A	K	Y	R	V	L	L	E	K	P	Y	K	A	L	F	G	V	E	I	N	L	A	V	H
Template Known Secondary structure		T	T	T	S				B	S		S	.	S	S					.				T	T												S	S	S														T	T											S	S
Template Predicted Secondary structure													.							.
Template SS confidence
		504	.	.	.	.	.	510	.	.	.	.		.	.	.	.	.	520		.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	P	Q	T	R	I	Q	A	Q	A	S	G	Y	W	L	E	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	M	E	K	P	E	E	F	E	A	K	E	F	E	V	N	D	P
Template Known Secondary structure		S																		T
Template Predicted Secondary structure
Template SS confidence
		582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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