Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABZ6
Confidence100.00%DateThu Jan 5 11:16:47 GMT 2012
Rank2Aligned Residues284
% Identity84%Templatec2pv3B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:chaperone sura; PDBTitle: crystallographic structure of sura fragment lacking the second2 peptidyl-prolyl isomerase domain complexed with peptide nftlkfwdifrk
Resolution3.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90.........100....
Predicted Secondary structure 


















Query SS confidence 















































































Query Sequence  VDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIA
Query Conservation     


 
 
  

  
                        
    
  

   

 
 
   

 

  

   
    
Alig confidence 















































































Template Conservation   
 


 
 
  

  
                             
  

   
    
    
      
        
Template Sequence  VDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIA
Template Known Secondary structure 


SSST




S




Template Predicted Secondary structure 

















Template SS confidence 















































































   25....30.........40.........50.........60.........70.........80.........90.........100....
 
   105....110.........120.........130.........140.........150.........160.........170.........180....
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  KQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLP
Query Conservation               
   
 
                                                            
Alig confidence 















































































Template Conservation               
   
 
                                                      
     
Template Sequence  KQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLP
Template Known Secondary structure  TTT

T





GGG

SS




Template Predicted Secondary structure 





















Template SS confidence 















































































   105....110.........120.........130.........140.........150.........160.........170.........180....
 
   185....190.........200.........210.........220.........230.........240.........250.........260....
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  ENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVG
Query Conservation                       
    

   
   
                  
          
  
  
 

    
Alig confidence 













..................................................................
Template Conservation                ..................................................................
Template Sequence  ENPTSDQVNEAESQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SS

..................................................................
Template Predicted Secondary structure 



..................................................................
Template SS confidence 















































































   185....190........
 
   265....270.........280.........290.........300.........310.........320.........330.........340....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  FHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWA
Query Conservation    
                                   
                     
     
  
    
  
  
Alig confidence  .............................................






















.










Template Conservation  .............................................           
  

   
   .     
     
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ARAIVDQARNDFGKLAIAHSADQ. QALNGGQMGWG
Template Known Secondary structure  .............................................T




SS.GGGGTS

Template Predicted Secondary structure  .............................................







.










Template SS confidence 















































































   199200.........210.........220. ........230..
 
   345....350.........360.........370.........380.........390.........400.........410.........420....
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  TPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVK
Query Conservation               
 
  
 

  
    
  

 
             
  
   
   
           

  
 
 
Alig confidence 








































.......































Template Conservation      
       
  
  
 

 

 
  

 

 
     .......        
               
   
 
 
Template Sequence  RIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLAA. . . . . . . QKDRAYRMLMNRKFSEEAASWMQEQRASAYVK
Template Known Secondary structure  TTTS
TTTTT

TT

SS


.......TTSS
Template Predicted Secondary structure 
















.......



Template SS confidence 















































































   235....240.........250.........260.........270..... ....280.........290.........300.......
 
   425..
Predicted Secondary structure 

Query SS confidence 


Query Sequence  ILS
Query Conservation 
  
Alig confidence 


Template Conservation 
  
Template Sequence  ILS
Template Known Secondary structure 

Template Predicted Secondary structure 
Template SS confidence 


   425..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions