Job Description P0ABZ6 Confidence 96.24% Date Thu Jan 5 11:16:47 GMT 2012 Rank 23 Aligned Residues 106 % Identity 12% Template c1w26B_ PDB info PDB header:chaperone Chain: B: PDB Molecule:trigger factor; PDBTitle: trigger factor in complex with the ribosome forms a2 molecular cradle for nascent proteins Resolution 2.7 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																															.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.
Query Sequence		V	L	E	S	D	V	D	G	L	M	Q	S	V	K	L	N	A	A	Q	A	R	Q	Q	L	P	D	D	A	T	.	.	.	.	.	.	L	R	H	Q	I	M	E	R	L	I	M	D	Q	I	I	L	Q	M	G	Q	K	M	G	V	K	I	S	D	E	Q	L	D	Q	A	I	A	N	I	A	K	Q	N	N	M	T
Query Conservation																															.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	A	A	L	I	D	S	E	I	D	V	L	R	R	Q	A	A	Q	R	F	G	G	N	E	K	Q	A	L	E	L	P	R	E	L	F	E	E	Q	A	K	R	R	V	V	V	G	L	L	L	G	E	V	I	R	T	N	E	L	K	A	D	E	E	R	V	K	G	L	I	E	E	X	A	S	A	Y	E	D	P
Template Known Secondary structure																					T	S	S			T	T					S		G	G	G	T																					T	T																	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	Q	M	R	S	R	L	A	Y	D	G	L	N	Y	N	T	Y	R	N	Q	I	R	K	E	M	I	I	S	E	V	R	N	N	E	V	R
Query Conservation
Alig confidence													.	.	.	.	.
Template Conservation													.	.	.	.	.
Template Sequence		K	E	V	I	E	F	Y	S	K	N	K	.	.	.	.	.	E	L	X	D	N	X	R	N	V	A	L	E	E	Q	A	V	E	A	V	L	A
Template Known Secondary structure										T			.	.	.	.	.																					T
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.						.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions