Return to main results Retrieve Phyre Job Id

Job DescriptionP75684
Confidence98.97%DateThu Jan 5 12:13:05 GMT 2012
Rank25Aligned Residues108
% Identity7%Templatec3jv9B_
PDB info PDB header:transcriptionChain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: the structure of a reduced form of oxyr from n. meningitidis
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80.........90.
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  GRGECFLASGGNTHKCIGWRQSPEVAPYRWPFEENGRTFDLAIEPQITTNDLRLMLRLALAGGGITIATQETFRPYIESG
Query Conservation    
       
  
 

  
         
     
    
     
  
       

  
 


 

   
   
  
Alig confidence 


















...












.......





































Template Conservation                  
  ...             .......                
  
 


 

           
Template Sequence  EELDAVSPRXLGEEQVLLL. . . TEGNCXRDQVLSS. . . . . . . CTNTLQGSSINTIRHXVASGLAISVLPATALTENDHXL
Template Known Secondary structure  GG
SS

SSGGGGS
...
TT
TT.......




SSTTS
GGG

GGGGGT
Template Predicted Secondary structure 











...




.......










Template SS confidence 















































































   176...180.........190.... .....200....... ..210.........220.........230.........240.....
 
   92.......100.........110.........120.........130
Predicted Secondary structure 

















Query SS confidence 






































Query Sequence  KLVSLLDDFLPQFPGFYLYFPQRRNIAPKLRALIDYVKE
Query Conservation   

 

          


         


 


 
 
Alig confidence  .





































Template Conservation  .
    
        
 

                 
  
Template Sequence  . FSIIPFEGTPPSRRVVLAYRRNFVRPKALSAXKAAIXQ
Template Known Secondary structure  .
SSS

TT


T
Template Predicted Secondary structure  .












Template SS confidence 






































   258.260.........270.........280.........290.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions