Job Description P75684 Confidence 99.03% Date Thu Jan 5 12:13:05 GMT 2012 Rank 21 Aligned Residues 125 % Identity 10% Template c1iz1B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:lysr-type regulatory protein; PDBTitle: crystal structure of cbnr, a lysr family transcriptional2 regulator Resolution 2.50 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	L	I	L	A	A	G	R	G	E	C	F	L	A	S	G	G	N	T	H	K	C	I	G	W	R	Q	S	P	E	V	A	P	Y	R	W	P	F	E	E	N	G	R	T	F	D	L	A	I	E	P	Q	I	T	T	N	D	L	R	L	M	L	R	L	A	L	A	G	G	G	I	T	I	A	T	Q	E	T	F
Query Conservation
Alig confidence																																							.
Template Conservation																																							.
Template Sequence		V	H	R	S	Q	S	G	K	F	G	K	T	C	K	L	A	D	L	R	A	V	E	L	T	L	F	P	R	G	G	R	P	S	F	A	D	E	.	V	I	G	L	F	K	H	A	G	I	E	P	R	I	A	R	V	V	E	D	A	T	A	A	L	A	L	T	M	A	G	A	A	S	S	I	V	P	A	S	V	A
Template Known Secondary structure				G	G	G	G	G	G	T	T	T				G	G	G	G	T	T	S							S	S	S	S	S						.									T										S	S										T	T	S
Template Predicted Secondary structure																																							.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	Y	I	E	S	G	K	L	V	S	L	L	D	D	F	L	P	Q	F	P	G	F	Y	L	Y	F	P	Q	R	R	N	I	A	P	K	L	R	A	L	I	D	Y	V	K	E	W	R	Q
Query Conservation
Alig confidence																		.	.															.
Template Conservation																		.	.															.
Template Sequence		A	I	R	W	P	D	I	A	F	A	R	I	V	G	T	R	.	.	V	K	V	P	I	S	C	I	F	R	K	E	K	Q	.	P	P	I	L	A	R	F	V	E	H	V	R	R	S	A	K
Template Known Secondary structure			S			T	T									S	S	.	.											S	S	S		.															T	T
Template Predicted Secondary structure																		.	.															.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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