Return to main results Retrieve Phyre Job Id

Job DescriptionP76145
Confidence98.69%DateThu Jan 5 12:19:38 GMT 2012
Rank210Aligned Residues132
% Identity16%Templated2o07a1
SCOP infoS-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases Spermidine synthase
Resolution1.89

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70..... ....80....
Predicted Secondary structure 






























.........








Query SS confidence 





























































. . . . . . . . .








Query Sequence  AERSRPAVELLARVPLENVEYVADLGCGPGNSTALLQQRWPAARITGIDSSPAMIAEARSAL. . . . . . . . . PDCQFVEAD
Query Conservation           

          








  
  

                         .........         
Alig confidence 





























































.........








Template Conservation     
 
 
          

 




 
 
      
       
  



  

  
            
 

 
   
Template Sequence  EFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGD
Template Known Secondary structure  TTSSS


TTSTT
TT

S

GGGG
TTS
Template Predicted Secondary structure 

































Template SS confidence 















































































   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   85... .90.........100.........110.........120.........130.........140.........150..
Predicted Secondary structure 



..

























Query SS confidence 



. .































































Query Sequence  IRNW. . QPVQALDLIFANASLQWLPDHYELFPHLVSLLNPQGVLAVQMPDNWLEPTHVLMREVAWEQNYP
Query Conservation      ..      
            
    
      




 
                          
Alig confidence 



..











.......












































Template Conservation      
      

 

 
....... 
 

       
 



 
                  

  

 
Template Sequence  GFEFMKQNQDAFDVIITD. . . . . . . SSESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFP
Template Known Secondary structure  T
SS
.......



TTT

S
Template Predicted Secondary structure 






.......















Template SS confidence 





































































   156...160.........170... ......180.........190.........200.........210........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions