Job Description P76145 Confidence 99.52% Date Thu Jan 5 12:19:38 GMT 2012 Rank 93 Aligned Residues 133 % Identity 11% Template c3lecA_ PDB info PDB header:structure genomics, unknown function Chain: A: PDB Molecule:nadb-rossmann superfamily protein; PDBTitle: the crystal structure of a protein in the nadb-rossmann2 superfamily from streptococcus agalactiae to 1.8a Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.							.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.
Query Sequence		V	E	L	L	A	R	V	P	L	E	N	V	E	Y	V	A	D	L	G	C	G	P	G	N	S	T	A	L	L	Q	Q	R	W	P	A	A	R	I	T	G	I	D	S	S	P	A	M	I	A	E	A	R	S	A	.	.	.	.	.	.	L	P	D	C	Q	F	V	E	A	D	I	R	N	W	Q	P	V	Q	A	L
Query Conservation																																																								.	.	.	.	.	.
Alig confidence									.																																															.	.	.	.	.	.
Template Conservation									.
Template Sequence		L	Q	K	V	A	N	Y	.	V	P	K	G	A	R	L	L	D	V	G	S	D	H	A	Y	L	P	I	F	L	L	Q	X	G	Y	C	D	F	A	I	A	G	E	V	V	N	G	P	Y	Q	S	A	L	K	N	V	S	E	H	G	L	T	S	K	I	D	V	R	L	A	N	G	L	S	A	F	E	E	A	D	N
Template Known Secondary structure							T	T	.	S		T	T							T		S	T	T									T	T										S	S														T	T		T	T	T							S	G	G	G	G			G	G	G
Template Predicted Secondary structure									.
Template SS confidence
		9	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	I	F	A	N	A	S	L	Q	W	L	P	D	H	Y	E	L	F	P	H	L	V	S	L	L	N	P	Q	G	V	L	A	V	Q	M	P	D	N	W	L	E	P	T	H	V	L	M	R	E	V	A	W	E	Q	N	Y	P	D	R	G	R	E	P	L	A	G	V	H	A	Y	Y	D	I	L	S	E	A	G	C
Query Conservation
Alig confidence													.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	T	I	T	I	C	G	X	G	G	.	R	L	I	A	D	I	L	N	N	D	I	D	K	L	Q	H	V	K	T	L	V	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	N	R	E	D	D	L	R	K	W	L	A	A	N	D	F
Template Known Secondary structure													.										T	G	G	G	G	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S												T	T
Template Predicted Secondary structure													.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																													.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	D	I	W	R	T	T	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	V	A	E	D	I	L	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions