Return to main results Retrieve Phyre Job Id

Job DescriptionP76145
Confidence97.93%DateThu Jan 5 12:19:38 GMT 2012
Rank273Aligned Residues116
% Identity16%Templatec3lduA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative methylase; PDBTitle: the crystal structure of a possible methylase from2 clostridium difficile 630.
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50 ........
Predicted Secondary structure 











......................................




Query SS confidence 

































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .







Query Sequence  SRPAVELLARVPLENVEYVADLGCGPGNSTALLQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QRWPAARI
Query Conservation        

          








  
  

......................................        
Alig confidence 

































......................................







Template Conservation 







 

       
 

 










       

  
 
 
                             
Template Sequence  ETLAAGLIYLTPWKAGRVLVDPXCGSGTILIEAAXIGINXAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKI
Template Known Secondary structure  TS


TTS
TT
TT
TT

TTTTS

GGGG
TTS
S

S



Template Predicted Secondary structure 































Template SS confidence 















































































   178.180.........190.........200.........210.........220.........230.........240.........250.......
 
   5960.........70..... ....80.........90.........100....... ..110.........120. .....
Predicted Secondary structure 













......





















....




..


Query SS confidence 
















. . . . . .































. . . .













. .




Query Sequence  TGIDSSPAMIAEARSAL. . . . . . PDCQFVEADIRNWQPVQALDLIFANASLQWLP. . . . DHYELFPHLVSLLN. . PQGVL
Query Conservation                   ......                   
            ....
    
      

..


 
Alig confidence 
















......































....













..




Template Conservation   
 

    
  
  
    
    
     
          
 







 
         

      

   


 
Template Sequence  YGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSY
Template Known Secondary structure  S
T
GGG

GGG


S
BS






STSBS
Template Predicted Secondary structure 































Template SS confidence 















































































   258.260.........270.........280.........290.........300.........310.........320.........330.......
 
   127..130..
Predicted Secondary structure 

Query SS confidence 





Query Sequence  AVQMPD
Query Conservation        
Alig confidence 





Template Conservation   


  
Template Sequence  YLITSY
Template Known Secondary structure  S
Template Predicted Secondary structure 

Template SS confidence 





   338.340...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions