Return to main results Retrieve Phyre Job Id

Job DescriptionP76145
Confidence99.65%DateThu Jan 5 12:19:38 GMT 2012
Rank56Aligned Residues147
% Identity20%Templatec3lccA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative methyl chloride transferase; PDBTitle: structure of a sam-dependent halide methyltransferase from arabidopsis2 thaliana
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70.... .....80.........90...
Predicted Secondary structure 





























....


















Query SS confidence 
























































. . . .


















Query Sequence  RPAVELLARVPLENVEYVADLGCGPGNSTALLQQRWPAARITGIDSSPAMIAEARSA. . . . LPDCQFVEADIRNWQPVQA
Query Conservation       

          








  
  

                        ....                   
Alig confidence 














.








































....


















Template Conservation    
            . 






 
     

  
  
 


 
   
  
                            
Template Sequence  PLIVHLVDTSSLPLG. RALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTEL
Template Known Secondary structure  TT
S

.T
TT

BTT
S
TTSGGGGG


TTT


SS
Template Predicted Secondary structure 





.
































Template SS confidence 















































































   54.....60........ .70.........80.........90.........100.........110.........120.........130..
 
   94.....100....... ..110.........120.........130.........140.........150.........160.........170.
Predicted Secondary structure 



..

























Query SS confidence 













. .































































Query Sequence  LDLIFANASLQWLP. . DHYELFPHLVSLLNPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLAGVHAYYDILSE
Query Conservation   
            ..
    
      




 
                                          
  
Alig confidence 













..






























................
















Template Conservation 

 
        
        
      




 
            ................ 
       
    
  
Template Sequence  FDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVG. . . . . . . . . . . . . . . . GPPYKVDVSTFEEVLVP
Template Known Secondary structure  SSTTTS
GGG


S


S................
SS



GG
Template Predicted Secondary structure 




















................






Template SS confidence 















































































   133......140.........150.........160.........170......... 180.........190......
 
   172.......180.
Predicted Secondary structure 




Query SS confidence 









Query Sequence  AGCEVDIWRT
Query Conservation   

       
Alig confidence 









Template Conservation   

       
Template Sequence  IGFKAVSVEE
Template Known Secondary structure  GT
Template Predicted Secondary structure 


Template SS confidence 









   197..200......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions