Job Description P76145 Confidence 99.94% Date Thu Jan 5 12:19:38 GMT 2012 Rank 3 Aligned Residues 249 % Identity 19% Template c3g5tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:trans-aconitate 3-methyltransferase; PDBTitle: crystal structure of trans-aconitate 3-methyltransferase2 from yeast Resolution 1.12 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																						.																					.	.	.	.	.	.	.
Query SS confidence																																																						.																					.	.	.	.	.	.	.
Query Sequence		S	D	W	N	P	S	L	Y	L	H	F	S	A	E	R	S	R	P	A	V	E	L	L	A	R	V	P	L	E	N	V	E	Y	V	A	D	L	G	C	G	P	G	N	S	T	A	L	L	Q	Q	R	W	.	P	A	A	R	I	T	G	I	D	S	S	P	A	M	I	A	E	A	R	S	.	.	.	.	.	.	.
Query Conservation																																																						.																					.	.	.	.	.	.	.
Alig confidence																																																						.																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	F	N	S	E	R	Y	S	S	S	R	P	S	Y	P	S	D	F	Y	K	X	I	D	E	Y	H	D	G	E	R	K	L	L	V	D	V	G	C	G	P	G	T	A	T	L	Q	X	A	Q	E	L	K	P	F	E	Q	I	I	G	S	D	L	S	A	T	X	I	K	T	A	E	V	I	K	E	G	S	P	D
Template Known Secondary structure		T	T										S																	S			S						T		T	T	T										S	S			S							S															S	T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.
Query Sequence		A	L	P	D	C	Q	F	V	E	A	D	I	R	N	W	Q	P	.	.	.	.	.	.	.	V	Q	A	L	D	L	I	F	A	N	A	S	L	Q	W	L	P	D	H	Y	E	L	F	P	H	L	V	S	L	L	N	P	Q	G	V	L	A	V	Q	M	P	D	N	W	L	E	P	T	H	V	L	M	R	E	V	A
Query Conservation																			.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																	.
Template Conservation																																										.
Template Sequence		T	Y	K	N	V	S	F	K	I	S	S	S	D	D	F	K	F	L	G	A	D	S	V	D	K	Q	K	I	D	X	I	T	A	V	E	C	A	H	W	F	.	D	F	E	K	F	Q	R	S	A	Y	A	N	L	R	K	D	G	T	I	A	I	W	G	Y	A	D	P	I	F	P	D	Y	P	E	F	D	D	L	X
Template Known Secondary structure		T	T	T	T								T	T			G	G	G		T	T	T	T	T	S	S									S		G	G	G	S	.																														T	T		G	G	G	T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																									.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	E	Q	N	Y	P	D	R	G	R	E	P	L	A	G	.	.	.	V	H	A	Y	Y	D	I	L	S	E	A	G	C	E	V	D	I	W	R	T	T	Y	Y	H	Q	M	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	Q	A	I	I	D	W	V	T	A
Query Conservation																	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	V	P	Y	G	K	Q	G	L	G	P	Y	W	E	Q	P	G	R	S	R	L	R	N	X	L	K	D	S	H	L	D	P	E	L	F	H	D	I	Q	V	S	Y	F	C	A	E	D	V	R	D	K	V	K	L	H	Q	H	T	K	K	P	L	L	I	R	K	Q	V	T	L	V	E	F	A	D	Y	V	R	T
Template Known Secondary structure								T	T	T	T	G	G	G	S		T	T							T	T	T	T	T					T	T	T											G	G	G	G	G									S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure			.																																.
Query SS confidence			.																																.
Query Sequence		T	.	G	L	R	P	W	L	Q	D	L	T	E	S	E	Q	Q	L	F	L	K	R	Y	H	Q	M	L	E	E	Q	Y	P	L	.	Q	E	N	G	Q	I	L	L	A	F	P	R	L	F	I	V	A	R	R	M
Query Conservation			.																																.
Alig confidence			.																																.
Template Conservation
Template Sequence		W	S	A	Y	H	Q	W	K	Q	D	P	K	N	K	D	K	E	D	V	A	D	W	F	I	K	E	S	L	R	R	R	P	E	L	S	T	N	T	K	I	E	V	V	W	N	T	F	Y	K	L	G	K	R	V
Template Known Secondary structure		S										G	G	G	T	T	S																T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions