Job Description P76145 Confidence 99.79% Date Thu Jan 5 12:19:38 GMT 2012 Rank 26 Aligned Residues 182 % Identity 23% Template c3e23A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein rpa2492; PDBTitle: crystal structure of the rpa2492 protein in complex with2 sam from rhodopseudomonas palustris, northeast structural3 genomics consortium target rpr299 Resolution 1.60 Å

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		6	.	.	.	10	.	.	.	.	.	.							.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		P	S	L	Y	L	H	F	S	A	E	R	.	.	.	.	.	.	S	R	P	A	V	E	L	L	A	R	V	P	L	E	N	V	E	Y	V	A	D	L	G	C	G	P	G	N	S	T	A	L	L	Q	Q	R	W	P	A	A	R	I	T	G	I	D	S	S	P	A	M	I	A	E	A	R	S	A	L	P	D	C	Q
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.											.	.																											.	.																				.
Template Conservation																													.	.																											.	.																				.
Template Sequence		L	R	F	Y	R	G	N	A	T	A	Y	A	E	R	Q	P	R	S	A	T	L	T	K	F	L	G	E	.	.	L	P	A	G	A	K	I	L	E	L	G	C	G	A	G	Y	Q	A	E	A	X	L	A	A	G	F	.	.	D	V	D	A	T	D	G	S	P	E	L	A	A	E	A	S	R	R	L	.	G	R	P
Template Known Secondary structure								S					T	T													T	T	.	.	S		T	T						S	S		T	T	S									T	T		.	.							S													.	T	S
Template Predicted Secondary structure																													.	.																											.	.																				.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		F	V	E	A	D	I	R	N	W	Q	P	V	Q	A	L	D	L	I	F	A	N	A	S	L	Q	W	L	P	.	.	D	H	Y	E	L	F	P	H	L	V	S	L	L	N	P	Q	G	V	L	A	V	Q	M	P	D	N	W	L	E	P	T	H	V	L	M	R	E	V	A	W	E	Q	N	Y	P	D	R	G	R	E
Query Conservation																														.	.
Alig confidence																														.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	T	X	L	F	H	Q	L	D	A	I	D	A	Y	D	A	V	W	A	H	A	C	L	L	H	V	P	R	D	E	L	A	D	V	L	K	L	I	W	R	A	L	K	P	G	G	L	F	Y	A	S	Y	K	S	G	E	.	.	.	.	.	.	.	.	.	.	.	.	G	E	G	R	D	K	L	A	R	Y	Y
Template Known Secondary structure							G	G	G					S									S		G	G	G	S																														S	.	.	.	.	.	.	.	.	.	.	.	.	S					T	T	S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.													.	.	.	.	150	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	A	G	V	H	A	Y	Y	D	I	L	S	E	A	G	C	E	V	D	I	W	R	T	T	Y	Y	H	Q	M	P	S	H	Q	A	I	I	D	W	V	T	A	T	G	L	R	P	W	L	Q	D	L	T	E	S	E	Q	Q	L	F	L	K	R	Y	H	Q	M	L	E	E	Q	Y	P	L	Q	E	N	G	Q	I
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Y	P	S	E	E	W	L	R	A	R	Y	A	E	A	G	T	W	A	S	V	A	V	E	S	S	E	G	K	G	F	D	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																				S												T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	F	P	R	L	F	I	V	A	R	R	M	E
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	L	A	Q	F	L	H	V	S	V	R	K	P	E
Template Known Secondary structure		.	.
Template Predicted Secondary structure		.	.
Template SS confidence
				191	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions