Job Description P76145 Confidence 98.57% Date Thu Jan 5 12:19:38 GMT 2012 Rank 227 Aligned Residues 119 % Identity 13% Template c3c0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0064 protein yccw; PDBTitle: crystal structure of a ribosomal rna methyltranferase Resolution 2.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		S	R	P	A	V	E	L	L	A	R	V	P	L	E	N	V	E	Y	V	A	D	L	G	C	G	P	G	N	S	T	A	L	L	Q	Q	R	W	P	A	A	R	I	T	G	I	D	S	S	P	A	M	I	A	E	A	R	S	A	L	P	D	C	Q	F	V	E	A	D	I	R	N	W	Q	P	V	Q	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence														.	.																							.																																								.	.	.	.
Template Conservation														.	.																							.
Template Sequence		Q	R	D	S	R	L	A	T	R	R	Y	V	.	.	E	N	K	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	X	G	.	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R	D	D	V	F	K	L	L
Template Known Secondary structure		G												.	.	T	T							T		T	T	T									T	.	T		S							S															T	T			G	G	G						S
Template Predicted Secondary structure														.	.																							.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
										93	.	.	.	.	.	.										100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	A	L	D	L	I	F	A	.	.	.	.	.	.	.	.	.	N	A	S	L	Q	W	L	P	D	H	Y	E	L	F	P	H	L	V	S	L	L	N	P	Q	G	V	L	A	V	Q	M	P	D	N	W	L	E	P	T
Query Conservation		.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	Y	R	D	R	G	E	K	F	D	V	I	V	X	D	P	P	K	F	V	E	N	K	S	Q	L	X	G	A	C	R	G	Y	K	D	I	N	X	L	A	I	Q	L	L	N	E	G	G	I	L	L	T	F	S	C	S	G	L	X	T	S	D
Template Known Secondary structure							T	T											S	S		S	S	T	T		S	S	S				T												T														T	T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions