Job Description P76145 Confidence 98.39% Date Thu Jan 5 12:19:38 GMT 2012 Rank 243 Aligned Residues 126 % Identity 15% Template c3bwbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of the apo form of spermidine synthase from2 trypanosoma cruzi at 2.5 a resolution Resolution 2.50 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.										.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.															.	.	.
Query Sequence		L	A	R	V	P	L	E	N	V	E	Y	V	A	D	L	G	C	G	P	G	N	S	T	A	L	L	Q	Q	R	W	P	A	A	R	I	T	G	I	D	S	S	P	A	M	I	A	E	A	R	S	.	.	.	.	.	.	.	.	.	A	L	P	D	C	Q	F	V	E	A	D	I	R	N	.	.	.	W	Q	P	V
Query Conservation																																																				.	.	.	.	.	.	.	.	.															.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		T	S	L	C	S	H	P	K	P	E	R	V	L	I	I	G	G	G	D	G	G	V	L	R	E	V	L	R	H	G	T	V	E	H	C	D	L	V	D	I	D	G	E	V	X	E	Q	S	K	Q	H	F	P	Q	I	S	R	S	L	A	D	P	R	A	T	V	R	V	G	D	G	L	A	F	V	R	Q	T	P	D
Template Known Secondary structure					T	T	S	S											T	T	S							T	T		T	T									S																	G	G	G	G		T	T						S								T	S		T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		Q	A	L	D	L	I	F	A	.	N	A	S	L	Q	W	L	P	D	H	Y	E	L	F	P	H	L	V	S	L	L	N	P	Q	G	V	L	A	V	Q	M	P	D	N	W	L	E	P	T	H	V	L	M	R	E	V	A	W	E	Q
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		N	T	Y	D	V	V	I	I	D	T	T	D	P	A	S	K	L	F	G	E	A	F	Y	K	D	V	L	R	I	L	K	P	D	G	I	C	C	N	Q	G	E	S	I	W	L	D	L	E	L	I	E	K	X	S	R	F	I	R	E
Template Known Secondary structure		T										S						S	S																									T	T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions