Job Description P76145 Confidence 99.89% Date Thu Jan 5 12:19:38 GMT 2012 Rank 8 Aligned Residues 229 % Identity 11% Template c3bkxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of cyclopropane-fatty-acyl-phospholipid synthase-2 like protein (yp_807781.1) from lactobacillus casei atcc 334 at 1.853 a resolution Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																														.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	F	S	A	E	R	S	R	P	A	V	E	L	L	A	R	V	P	L	E	N	V	E	Y	V	A	D	L	G	C	G	P	G	N	S	T	A	L	L	Q	Q	R	W	.	P	A	A	R	I	T	G	I	D	S	S	P	A	M	I	A	E	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																														.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	I	Q	R	R	Q	T	A	H	R	L	A	I	A	E	A	W	Q	V	K	P	G	E	K	I	L	E	I	G	C	G	Q	G	D	L	S	A	V	L	A	D	Q	V	G	S	S	G	H	V	T	G	I	D	I	A	S	P	D	Y	G	A	P	L	T	L	G	Q	A	W	N	H	L	L	A	G	P	L	G	D
Template Known Secondary structure																				T			T	T							S		T	T	S												T	T								S	S		T	T			S	S	S												S	T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.									.	.	.	140	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.
Query Sequence		S	A	L	P	D	C	Q	F	V	E	A	D	I	R	N	W	Q	P	V	Q	A	L	D	L	I	F	A	N	A	S	L	Q	W	L	P	D	H	Y	E	L	F	P	H	L	V	S	L	L	N	P	Q	G	V	L	A	V	Q	M	P	D	N	W	L	E	.	.	.	.	.	.	.	.	P	T	H	V	L	M	R	E
Query Conservation																																																																		.	.	.	.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	T	V	H	F	N	T	N	L	S	D	D	L	G	P	I	A	D	Q	H	F	D	R	V	V	L	A	H	S	L	W	Y	F	A	S	A	N	A	L	A	L	L	F	K	N	X	A	A	V	C	D	H	V	D	V	A	E	W	S	X	Q	P	T	A	L	D	Q	I	G	H	L	Q	A	A	X	I	Q	G	L
Template Known Secondary structure		G					S	S			T	T	T			G	G	G	T	T				S						S		G	G	G	S	S													T	T	T		S									S	S		S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	W	E	Q	N	Y	P	D	R	G	R	E	P	L	A	G	V	H	A	Y	Y	D	I	L	S	E	A	G	C	E	V	D	I	W	R	T	T	Y	Y	H	Q	M	P	S	H	Q	A	I	I	D	W	V	T	A	T	G	L	R	P	W	L	Q	D	L	T	E	S	E	Q	Q	L	F	L	K	R	Y	H	Q	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	A	I	A	P	S	D	V	A	N	I	R	T	L	I	T	P	D	T	L	A	Q	I	A	H	D	N	T	W	T	Y	T	A	G	T	I	V	E	D	P	T	L	D	D	A	H	W	E	I	A	T	T	N	A	L	L	T	E	L	K	L	S	T	D	L	R	D	R	V	K	P	L	L	E	A	X	S	H	N
Template Known Secondary structure						S			S	S					S														T	T									B			T	T	S	T																S																			T	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	E	Q	Y	P	L	Q	E	N	G	Q	I	L	L
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		G	T	A	S	L	A	T	F	.	T	G	R	I	T	F
Template Known Secondary structure										.
Template Predicted Secondary structure										.
Template SS confidence
		261	.	.	.	.	.	.	.		.	270	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions