Job Description P76145 Confidence 100.00% Date Thu Jan 5 12:19:38 GMT 2012 Rank 1 Aligned Residues 244 % Identity 44% Template c2p35A_ PDB info PDB header:transferase Chain: A: PDB Molecule:trans-aconitate 2-methyltransferase; PDBTitle: crystal structure of trans-aconitate methyltransferase from2 agrobacterium tumefaciens Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	L	Y	L	H	F	S	A	E	R	S	R	P	A	V	E	L	L	A	R	V	P	L	E	N	V	E	Y	V	A	D	L	G	C	G	P	G	N	S	T	A	L	L	Q	Q	R	W	P	A	A	R	I	T	G	I	D	S	S	P	A	M	I	A	E	A	R	S	A	L	P	D	C	Q	F	V	E	A	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	Q	Y	L	K	F	E	D	E	R	T	R	P	A	R	D	L	L	A	Q	V	P	L	E	R	V	L	N	G	Y	D	L	G	C	G	P	G	N	S	T	E	L	L	T	D	R	Y	G	V	N	V	I	T	G	I	D	S	D	D	D	X	L	E	K	A	A	D	R	L	P	N	T	N	F	G	K	A	D	L
Template Known Secondary structure			G	G	G						G	G	G								T	T				S			S	S					T		T	T	T												T	T	S						S												S	T	T	S							T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	W	Q	P	V	Q	A	L	D	L	I	F	A	N	A	S	L	Q	W	L	P	D	H	Y	E	L	F	P	H	L	V	S	L	L	N	P	Q	G	V	L	A	V	Q	M	P	D	N	W	L	E	P	T	H	V	L	M	R	E	V	A	W	E	Q	N	Y	P	D	R	G	R	E	P	L	A	G	V	H	A	Y
Query Conservation
Alig confidence																																																																									.
Template Conservation																																																																									.
Template Sequence		A	T	W	K	P	A	Q	K	A	D	L	L	Y	A	N	A	V	F	Q	W	V	P	D	H	L	A	V	L	S	Q	L	X	D	Q	L	E	S	G	G	V	L	A	V	Q	X	P	D	N	L	Q	E	P	T	H	I	A	X	H	E	T	A	D	G	G	P	W	K	D	A	F	K	.	P	L	P	P	P	S	D	Y
Template Known Secondary structure		T	T				S	S									S		G	G	G	S	T	T									G	G	G															T	T	S													S	T	T	G	G	G			.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	I	L	S	E	A	G	C	E	V	D	I	W	R	T	T	Y	Y	H	Q	M	P	S	H	Q	A	I	I	D	W	V	T	A	T	G	L	R	P	W	L	Q	D	L	T	E	S	E	Q	Q	L	F	L	K	R	Y	H	Q	M	L	E	E	Q	Y	P	L	Q	E	N	G	Q	I	L	L	A	F	P	R	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	N	A	L	S	P	K	S	S	R	V	D	V	W	H	T	V	Y	N	H	P	X	K	D	A	D	S	I	V	E	W	V	K	G	T	G	L	R	P	Y	L	A	A	A	G	E	E	N	R	E	A	F	L	A	D	Y	T	R	R	I	A	A	A	Y	P	P	X	A	D	G	R	L	L	L	R	F	P	R	L	F
Template Known Secondary structure						G	G	G																S										T	T	T	T	T	T					T	T		G	G	G																S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		246	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	A	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	A	V	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions