Job Description P76145 Confidence 47.38% Date Thu Jan 5 12:19:38 GMT 2012 Rank 371 Aligned Residues 185 % Identity 9% Template c1xa0B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative nadph dependent oxidoreductases; PDBTitle: crystal structure of mcsg target apc35536 from bacillus2 stearothermophilus Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		P	S	L	Y	L	H	F	S	A	E	R	S	R	P	A	V	E	L	L	A	R	V	P	L	E	N	V	E	Y	V	A	D	L	G	C	G	P	G	N	.	S	T	A	L	L	Q	Q	R	W	P	A	A	R	I	T	G	I	D	S	S	P	A	M	I	A	E	A	R	S	A	L	P	D	C	Q	F	V	E	A	D
Query Conservation																																									.
Alig confidence																																									.
Template Conservation
Template Sequence		A	X	A	I	G	T	A	G	F	T	A	A	L	S	I	H	R	L	E	E	H	G	L	T	P	E	R	G	P	V	L	V	T	G	A	T	G	G	V	G	S	L	A	V	S	X	L	A	K	R	G	Y	T	V	E	A	S	T	G	K	A	A	E	H	D	Y	L	R	V	L	G	A	K	E	V	L	A	E	R	I
Template Known Secondary structure																					T	T	T			G	G	G								T	T	S													T	T								S		G	G	G								T		S							S
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		I	R	N	W	Q	P	V	Q	A	L	D	L	I	F	A	N	A	S	L	Q	W	L	P	D	H	Y	E	L	F	P	H	L	V	S	L	L	N	P	Q	G	V	L	A	V	Q	M	P	D	N	W	L	E	P	T	H	V	L	M	R	E	V	A	W	E	Q	N	Y	P	D	R	G	R	E	P	L	A	.	G	V	H
Query Conservation																																																																														.
Alig confidence																			.	.	.	.	.	.	.	.	.																																																			.
Template Conservation																			.	.	.	.	.	.	.	.	.
Template Sequence		R	P	L	D	K	Q	R	W	A	A	A	V	D	P	V	G	G	.	.	.	.	.	.	.	.	.	R	T	L	A	T	V	L	S	R	X	R	Y	G	G	A	V	A	V	S	G	L	T	G	G	A	E	V	P	T	T	V	H	P	F	I	L	R	G	V	S	L	L	G	I	D	S	V	Y	C	P	X	D	L	R
Template Known Secondary structure		S	S			S	S									S	T	T	.	.	.	.	.	.	.	.	.	T	T					G	G	G											S			S	S	S						S							T								S	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.										.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	Y	D	I	L	S	E	A	G	C	E	V	D	I	W	R	T	T	Y	Y	H	Q	M	P	S	H	Q	A	I	I	D	W	V	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	I	W	E	R	L	A	G	D	L	K	P	D	L	E	R	I	A	Q	E	I	S	L	A	E	L	P	Q	A	L	K	R	I	L	R
Template Known Secondary structure									T	T	T	T													G	G	G										T
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions