Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEG4
Confidence23.70%DateThu Jan 5 11:23:14 GMT 2012
Rank276Aligned Residues75
% Identity17%Templatec3it9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:d-alanyl-d-alanine carboxypeptidase dacc; PDBTitle: crystal structure of penicillin-binding protein 6 (pbp6)2 from e. coli in apo state
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160.........170.........180.........190.........200...
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  ASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQLNPQGMDTSNMDVFVQQYADTVKY
Query Conservation     
   
   
 
                
      
   

 



 




         
             
  
Alig confidence 













































........

























Template Conservation   


 



 
 



  

  



   

  

  
  

   
........ 
 

 

      


 


 
   
Template Sequence  ADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNT. . . . . . . . TFQTVHGLDAPGQFSTARDMALLGKA
Template Known Secondary structure  T

SSTT
TT
........B

SSS



TT
BB
Template Predicted Secondary structure 












........












Template SS confidence 















































































   96...100.........110.........120.........130.........140. ........150.........160.......
 
   204..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  LSE
Query Conservation 
  
Alig confidence 


Template Conservation     
Template Sequence  LIH
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   168.170
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions