Job Description P0AEG4 Confidence 97.68% Date Thu Jan 5 11:23:14 GMT 2012 Rank 77 Aligned Residues 86 % Identity 26% Template c2yzuA_ PDB info PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure of oxidized thioredoxin from thermus thermophilus2 hb8 Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	P	Q	V	L	E	F	F	S	F	F	C	P	H	C	Y	Q	F	E	E	V	L	H	I	S	D	N	V	K	K	K	L	P	E	G	V	K	M	T	K	Y	H	V	N	F	M	G	G	D	L	G	K	D	L	T	Q	A	W	A	V	A	M	A	L	G	V	E	D	K	V	T	V	P	L	F	E	G	V	Q
Query Conservation
Alig confidence																									.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	P	L	V	L	V	D	F	W	A	E	W	C	A	P	C	R	X	I	A	P	I	L	.	.	.	E	E	I	A	K	E	Y	E	G	K	L	L	V	A	K	L	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S									T	T												.	.	.							T	B	T	T	B							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		K	T	Q	T	I	R	S	A	S	D	I	R	D	V	F	I	N	A	G	I	K	G	E	E	Y	D	A	A	W	N	S	F	V	V	K	S	L	V	A	Q	Q	E	K	A	A	A	D	V	Q	L	R	G	V	P	A	M	F	V	.	.	N	G	K	Y	Q	L	N	P	Q	G	M	D	T	S	N	M	D	V	F	V
Query Conservation																																																												.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.														.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	N	P	K	T	A	X	R	Y	R	V	X	S	I	P	T	V	I	L	F	K	D	G	Q	P	V	E	V	L	V	G	A	Q	P	.	.	.	.	.	.	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								T	T			S	S	S							T	T								S				.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template SS confidence
																																								60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.							.
		195	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	Y	A	D	T	V	K	Y	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	Y	Q	A	K	I	E	K	H	L
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions