 |
Job Description | P0AEG4 | Confidence | 28.63% | Date | Thu Jan 5 11:23:14 GMT 2012 |
Rank | 266 | Aligned Residues | 66 |
% Identity | 12% | Template | c2k6vA_ |
PDB info |
PDB header:electron transport | Chain: A: PDB Molecule:putative cytochrome c oxidase assembly protein; |
PDBTitle: solution structures of apo sco1 protein from thermus2 thermophilus
|
Resolution | UNK |
|
 |
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | P | Q | V | L | E | F | F | S | F | F | C | P | H | C | Y | Q | F | E | E | V | L | H | I | S | D | N | V | K | K | K | L | P | E | G | V | K | M | T | K | Y | H | V | N | F | M | G | G | D | L | G | K | D | L | T | Q | A | W | A | V | A | M | A | L | G |
Query Conservation |   |
  |   |   |   |
|
|
|
|   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | K | V | V | L | L | F | F | G | F | T | R | C | P | D | V | C | P | T | T | L | L | A | L | K | R | A | Y | E | K | L | P | P | K | A | Q | E | R | V | Q | V | I | F | V | S | V | D | P | E | R | D | P | P | E | V | A | D | R | Y | A | K | A | F | H | P | S |
Template Known Secondary structure |   |
T | S |  |  |  |  |  |  |  |
| T | T |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  | T | T |  |  |  |  |  |  |  | S |
| T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|