|   |
22 | . | . | . | . | . | |
|
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . |  |
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
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|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
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|
|
Query Sequence |   |
T | A | Y | P | D | P | . |
. |
. |
V | Q | A | A | F | I | A | E | Q | A | G | A | D | G | I | T | V | H | . |
. |
. |
. |
. |
L | R | E | D | R | R | H | I | T | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | D | V | R | I | L | R | Q | T | L | D | T | R | M | N | L | E | M | A | V | T | E |
Query Conservation |   |
  |   |   |
|
|   | . | . | . |
|   |
|
|   |   |
|   |   |
|
|
|
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|
|
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|
| . | . | . | . | . |
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|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
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|
| . | . | . | . | . |
|
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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|
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|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|
|
|
|   |
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |
|
|
|
|
|   |   |
|   |
|   |
Template Sequence |   |
A | G | D | P | D | L | A | T | T | A | E | A | L | R | L | L | D | G | C | G | A | D | V | I | E | L | G | V | P | C | S | D | P | Y | I | D | G | P | I | I | Q | A | S | V | A | R | A | L | A | S | G | T | T | M | D | A | V | L | E | M | L | R | E | V | T | P | E | L | S | C | P | V | V | L | L | S | Y | Y | K | P |
Template Known Secondary structure |   |
T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |  |  |  |  |
|
|
| S |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| S | S |
|  |  |  |  |
|
| S |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
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|
|
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|
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  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
  |
  |   |
78 | . | |
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
|
. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
 |  | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
|
| . |
. |
|
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|
|
Query Sequence |   |
E | M | . |
. |
. |
L | A | I | A | V | E | T | K | P | H | F | C | C | L | V | P | E | K | R | Q | E | V | T | T | E | G | G | L | D | V | A | G | Q | R | D | K | M | R | D | A | C | K | R | L | A | D | A | G | I | Q | V | S | L | F | I | D | A | D | . |
. |
E | E | Q | I | K | A | A | A | E | V | G | A | P | F | I |
Query Conservation |   |
|   | . | . | . |
|   |   |
|   |   |   |
|
|   |   |
|
|
|
|
|
|   |
|   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|   | . | . |   |   |   |
|   |   |
|   |   |   |
|
|
|   |
|
Alig confidence |   |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
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|
|
|
|
|
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|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
I | M | F | R | S | L | A | K | M | K | E | A | G | V | H | G | L | I | V | P | D | L | P | Y | V | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | H | S | L | W | S | E | A | K | N | N | N | L | E | L | V | L | L | T | T | P | A | I | P | E | D | R | M | K | E | I | T | K | A | S | E | G | F | V |
Template Known Secondary structure |   |
 |  | S |
|
| T |  |  |  |  |  | T | T |
|
|  |  |  |
| T | T |
|
| T | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
|  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |
|
| S |
|  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
  |
  |   |
153 | . | . | . | |
|
|
. | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | |
. | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
220 |
Predicted Secondary structure |   |
 |  |  |
| . | . | . |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |
Query SS confidence |   |
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
E | I | H | T | . |
. |
. |
G | C | Y | A | D | A | K | T | D | A | E | Q | A | Q | E | L | A | R | I | A | K | A | A | T | F | A | A | S | L | G | L | K | V | N | A | G | H | G | L | . |
T | Y | H | N | V | K | A | I | A | A | I | P | E | M | H | E | L | N | I | G | H | A | I | I | . |
. |
. |
. |
. |
. |
. |
. |
G |
Query Conservation |   |
|
|
|
| . | . | . |
|   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|
| . |   |
|   |
|
|   |   |
|
|   |
|   |   |
|   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
Alig confidence |   |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
| . | . | . | . | . | . |
|
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|
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| . |
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|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   | . | . | . | . | . | . |   |   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   | . |
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Y | L | V | S | V | N | G | V | T | G | P | R | A | N | V | N | P | R | V | E | S | L | I | Q | E | V | K | K | V | T | . |
. |
. |
. |
. |
. |
N | K | P | V | A | V | G | F | G | I | S | K | P | E | H | V | K | Q | I | A | Q | W | . |
G | A | D | G | V | I | I | G | S | A | M | V | R | Q | L | G | E | A | A | S | P |
Template Known Secondary structure |   |
 |  |  |
| S | S |
|
| B |
| T | T | S |
| B |
| T |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | S | S |
|  |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | . | T |
| S |  |  |  |  |
|  |  |  |  |  |  |  |  | S | S | S | S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | |
. | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
  |
  |   |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | A | V | M | T | G | L | K | D | A | V | A | E | M | K | R | L | M | L |
Query Conservation |   |
  |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |
|   |   |   |   |
|
|   |
|
|   |
Template Sequence |   |
K | Q | G | L | R | R | L | E | E | Y | A | R | G | M | K | N | A | L | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
244 | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
  |