Job Description P0A794 Confidence 86.20% Date Thu Jan 5 11:05:06 GMT 2012 Rank 117 Aligned Residues 197 % Identity 18% Template d1qopa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.4

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		22	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.																	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure								.	.	.																			.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.														.	.
Query SS confidence								.	.	.																			.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.														.	.
Query Sequence		T	A	Y	P	D	P	.	.	.	V	Q	A	A	F	I	A	E	Q	A	G	A	D	G	I	T	V	H	.	L	R	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	H	I	T	D	R	D	V	R	I	L	.	.	.	.	.	R	Q	T	L	D	T	R	M	N	L	E	M	A	.	.
Query Conservation								.	.	.																			.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.														.	.
Alig confidence								.	.	.																			.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.														.	.
Template Conservation
Template Sequence		L	G	D	P	G	I	E	Q	S	L	K	I	I	D	T	L	I	D	A	G	A	D	A	L	E	L	G	V	P	F	S	D	P	L	A	D	G	P	T	I	Q	N	A	N	L	R	A	F	A	A	G	V	T	P	A	Q	C	F	E	M	L	A	I	I	R	E	K	H	P	T	I	P	I	G	L	L	M	Y	A	N
Template Known Secondary structure		T	T	S	S															T	T		S	S								S			T	T															T	T																		S	S	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
							75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																															.	.
Query SS confidence		.	.	.	.	.																																																															.	.
Query Sequence		.	.	.	.	.	V	T	E	E	M	L	A	I	A	V	E	T	K	P	H	F	C	C	L	V	P	E	K	R	Q	E	V	T	T	E	G	G	L	D	V	A	G	Q	R	D	K	M	R	D	A	C	K	R	L	A	D	A	G	I	Q	V	S	L	F	I	D	A	.	.	D	E	E	Q	I	K	A	A	A	E	V
Query Conservation		.	.	.	.	.																																																															.	.
Alig confidence		.	.	.	.	.																		.									.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	F	N	N	G	I	D	A	F	Y	A	R	C	E	Q	V	G	V	D	S	V	.	L	V	A	D	V	P	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	A	P	F	R	Q	A	A	L	R	H	N	I	A	P	I	F	I	C	P	P	N	A	D	D	D	L	L	R	Q	V	A	S	Y
Template Known Secondary structure					T	T													T					.			T	T			G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G											T	T									T	T
Template Predicted Secondary structure																								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.															.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.																									.	.	.	.	.	.	.
Query SS confidence																																																		.																									.	.	.	.	.	.	.
Query Sequence		G	A	P	F	I	E	I	H	T	G	C	Y	A	D	A	K	T	D	A	E	Q	A	Q	E	L	A	R	I	A	K	A	A	T	F	A	A	S	L	G	L	K	V	N	A	G	H	G	L	.	T	Y	H	N	V	K	A	I	A	A	I	P	E	M	H	E	L	N	I	G	H	A	I	I	.	.	.	.	.	.	.
Query Conservation																																																		.																									.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.																			.											.														.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.																														.
Template Sequence		G	R	G	Y	T	Y	L	L	S	R	S	G	V	T	G	A	E	N	R	G	P	L	H	H	L	.	.	.	.	.	I	E	K	L	K	E	Y	H	A	A	P	A	L	Q	G	F	G	I	S	S	P	E	Q	V	S	A	A	V	R	.	A	G	A	A	G	A	I	S	G	S	A	I	V	K	I	I	E	K	N	L
Template Known Secondary structure				S						S	S	S	S				S	S	S								.	.	.	.	.							T	T								S	S			S										.	T	T		S															T	T
Template Predicted Secondary structure																											.	.	.	.	.																														.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	G	R	A	V	M	T	G	L	K	D	A	V	A	E	M	K	R	L	M	L
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		A	S	P	K	Q	M	L	A	E	L	R	S	F	V	S	A	M	K	A	A	S	R
Template Known Secondary structure		T																			T	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions