 |
Job Description | P0A794 | Confidence | 86.54% | Date | Thu Jan 5 11:05:06 GMT 2012 |
Rank | 113 | Aligned Residues | 56 |
% Identity | 21% | Template | d1nyra1 |
SCOP info | Anticodon-binding domain-like
| Class II aaRS ABD-related
| Anticodon-binding domain of Class II aaRS
|
Resolution | 2.80 |
|
 |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
|
. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | K | P | H | F | C | C | L | V | P | E | K | R | Q | E | V | T | T | E | G | G | L | D | V | A | G | Q | R | D | K | M | R | D | A | C | K | R | L | A | D | A | G | I | Q | V | S | L | F | I | D | A | D | . |
. |
E | E | Q | I | K | A | A | A | E | V | G | A | P | F | I |
Query Conservation |   |
  |
|
|   |   |
|
|
|
|
|
|   |
|   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|   | . | . |   |   |   |
|   |   |
|   |   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |
|
|
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |
|   |   |   |   |
|
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |   |
Template Sequence |   |
L | A | P | K | Q | V | Q | I | I | P | V | N | V | D | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | Y | D | Y | A | R | Q | L | Q | D | E | L | K | S | Q | G | V | R | V | S | I | D | D | R | N | E | K | M | G | Y | K | I | R | E | A | Q | M | Q | K | I | P | Y | Q |
Template Known Secondary structure |   |
T |
| S | S |
|  |  |  |  |  | S | S |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
543 | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|