|   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
|
|
|
|
. | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 140 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | L | D | V | A | G | Q | R | D | K | M | R | D | A | C | K | R | L | A | D | A | G | I | Q | V | S | L | F | I | . |
. |
. |
. |
. |
. |
. |
D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | D | E | E | Q | I | . |
. |
. |
. |
. |
K | A | A | A | E | V | G | A | P | F | I | E | I | H | T | G | C | Y |
Query Conservation |   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
| . | . | . | . | . |   |   |
|   |   |   |
|
|
|   |
|
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
|
|   |   |
|
|   |
|
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|   |
Template Sequence |   |
S | E | E | S | L | Q | E | N | I | E | I | C | S | K | Y | L | E | R | M | S | K | I | G | M | T | L | E | I | E | L | G | C | T | G | G | E | E | D | G | V | D | N | S | H | M | D | A | S | A | L | Y | T | Q | P | E | D | V | D | Y | A | Y | T | E | L | S | K | I | S | P | R | F | T | I | A | A | S | F | G | N | V |
Template Known Secondary structure |   |
T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| S |
|
|
|
|
|
|
|
|
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  |  |
|
| S | S |
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
  |
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | A | K | T | D | A | E | Q | A | Q | E | L | A | R | I | A | K | A | A | T | F | A | A | . |
. |
. |
. |
. |
. |
. |
. |
S | L | G | L | K | V | N | A | G | H | G | L | T | Y | H | N | V | K | A | I | A | A | I | P | E | M | H | E | L | N | I | G | H | A | I | I | G | R | A | V | M | T | G | L | K | D | A | V |
Query Conservation |   |
|   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   | . | . | . | . | . | . | . | . |   |
|
|
|   |
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |
|
|
|   | . |   |
|
|   |
|
|
|
|   |
|
|
|   |   | . | . | . | . | . |
|   |   |   |   |
|
Template Sequence |   |
H | G | V | Y | K | A | G | N | V | V | L | T | P | T | I | L | R | D | S | Q | E | Y | V | S | K | K | H | N | L | P | H | N | S | L | N | F | V | F | H | G | G | S | G | S | T | A | Q | E | I | K | D | S | V | S | . |
Y | G | V | V | K | M | N | I | D | T | D | T | Q | W | . |
. |
. |
. |
. |
A | T | W | E | G | V |
Template Known Secondary structure |   |
| S | S |
|
|
| S |
|
|
|
|
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| T | T |
| S |
|  |  |  |
| S |
| T | T |
|
|  |  |  |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  |
|  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |
|  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
226 | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | |
|
|
|
|
. | . | . | . | . | . |
  |
  |   |
232 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
A | E | M | K | R |
Query Conservation |   |
  |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
Template Sequence |   |
L | N | Y | Y | K |
Template Known Secondary structure |   |
 |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
300 | . | . | . | . |
  |