Job Description P0A794 Confidence 94.54% Date Thu Jan 5 11:05:06 GMT 2012 Rank 53 Aligned Residues 198 % Identity 16% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		22	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.																		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.												.	.
Query SS confidence											.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.												.	.
Query Sequence		T	A	Y	P	D	P	V	Q	A	.	.	.	A	F	I	A	E	Q	A	G	A	D	G	I	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	R	E	D	R	R	H	I	T	D	R	D	V	R	I	L	R	Q	T	L	D	.	.	T	R	M	N	L	E	M	A	V	T	E	.	.
Query Conservation											.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.												.	.
Alig confidence											.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.												.	.
Template Conservation
Template Sequence		L	G	Y	P	N	L	Q	T	S	E	A	F	L	Q	R	L	D	Q	S	P	I	D	I	L	E	L	G	V	A	Y	S	D	P	I	A	D	G	E	I	I	A	D	A	A	K	I	A	L	D	Q	G	V	D	I	H	S	V	F	E	L	L	A	R	I	K	T	K	K	A	L	V	F	X	V	Y	Y	N	L	I	F
Template Known Secondary structure		T	T	S	S											T	G	G	G	S	S		S								S	S					S	S													T	T												T				S	S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
							78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.	.	.	.	.																																																												.	.
Query SS confidence		.	.	.	.	.																																																												.	.
Query Sequence		.	.	.	.	.	E	M	L	A	I	A	V	E	T	K	P	H	F	C	C	L	V	P	E	K	R	Q	E	V	T	T	E	G	G	L	D	V	A	G	Q	R	D	K	M	R	D	A	C	K	R	L	A	D	A	G	I	Q	V	S	L	F	I	D	A	.	.	D	E	E	Q	I	K	A	A	A	E	V	G	A	P
Query Conservation		.	.	.	.	.																																																												.	.
Alig confidence		.	.	.	.	.											.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Y	G	L	E	K	F	V	K	K	A	K	S	L	G	.	I	C	A	L	I	V	P	E	L	S	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	D	D	L	I	K	E	C	E	R	Y	N	I	A	L	I	T	L	V	S	V	T	T	P	K	E	R	V	K	K	L	V	K	H	A	K	G
Template Known Secondary structure															T	T	.							T	T			G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G												T									T	T	S										T	T			S
Template Predicted Secondary structure																	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.															.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		F	I	E	I	H	T	G	C	Y	A	D	A	K	T	D	A	E	Q	A	Q	E	L	A	R	I	A	K	A	A	T	F	A	A	S	L	.	G	L	K	V	N	A	G	H	G	L	T	Y	H	N	V	K	A	I	A	A	I	P	E	M	H	E	L	N	I	G	H	A	I	I	G	R	A	V	M	T	G	L	K	D
Query Conservation																																					.
Alig confidence							.	.	.	.																											.																						.
Template Conservation							.	.	.	.																																																	.
Template Sequence		F	I	Y	L	L	.	.	.	.	A	S	I	G	I	T	G	T	K	S	V	E	E	A	I	L	Q	D	K	V	K	E	I	R	S	F	T	N	L	P	I	F	V	G	F	G	I	Q	N	N	Q	D	V	K	R	X	R	K	.	V	A	D	G	V	I	V	G	T	S	I	V	K	C	F	K	Q	G	N	L	D	I
Template Known Secondary structure							.	.	.	.			S		S	S																			T	T			S						S	S			S	S							T	T	.	T	S	S												T	T	S	S
Template Predicted Secondary structure							.	.	.	.																																																	.
Template SS confidence
		164	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	E	M	K	R	L	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	X	K	D	I	E	E	I	F	K
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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