Return to main results Retrieve Phyre Job Id

Job DescriptionP0A794
Confidence42.70%DateThu Jan 5 11:05:06 GMT 2012
Rank254Aligned Residues93
% Identity18%Templatec3pjwA_
PDB info PDB header:lyaseChain: A: PDB Molecule:cyclic dimeric gmp binding protein; PDBTitle: structure of pseudomonas fluorescence lapd ggdef-eal dual domain, i23
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.. .......140.........150.........160.........170.........180.........190
Predicted Secondary structure 


.













Query SS confidence 




















.

























































Query Sequence  QRDKMRDACKRLADAGIQVSL. FIDADEEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVN
Query Conservation      
   
  
   





.



    
  
   


 





 

 
        

  
  

  
  


 

Alig confidence 




















.





































...
















Template Conservation             
   
    

 

        
  
  
 



               ... 
  
   
    
 

Template Sequence  EQAVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRAIDQESDKRL. . . FIEAIQRAAHSIDLPLI
Template Known Secondary structure 
TT

S
GGGTSS

S

TTTTTTTTT
...TTT

Template Predicted Secondary structure 





















...



Template SS confidence 















































































   539540.........550.........560.........570.........580.........590........ .600.........610.....
 
   191........200.......
Predicted Secondary structure 






Query SS confidence 
















Query Sequence  AGHGLTYHNVKAIAAIP
Query Conservation 




 
 

  

 
 
Alig confidence 
















Template Conservation 
 


       
   
Template Sequence  AERVETEGELSVIREMG
Template Known Secondary structure 



STTT
Template Predicted Secondary structure 




Template SS confidence 
















   616...620.........630..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions