Job Description P0A794 Confidence 21.47% Date Thu Jan 5 11:05:06 GMT 2012 Rank 388 Aligned Residues 62 % Identity 16% Template c3ktsA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 Resolution 2.75 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.		.	.
Predicted Secondary structure																																																														.	.	.	.	.	.												.
Query SS confidence																																																														.	.	.	.	.	.												.
Query Sequence		T	E	E	M	L	A	I	A	V	E	T	K	P	H	F	C	C	L	V	P	E	K	R	Q	E	V	T	T	E	G	G	L	D	V	A	G	Q	R	D	K	M	R	D	A	C	K	R	L	A	D	A	G	I	Q	V	S	L	F	I	D	.	.	.	.	.	.	A	D	E	E	Q	I	K	A	A	A	E	.	V	G
Query Conservation																																																														.	.	.	.	.	.												.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.												.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Q	K	D	M	E	K	I	L	E	L	D	L	T	Y	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	M	L	E	T	H	V	A	Q	L	K	A	L	V	K	Y	A	Q	A	G	G	K	K	V	L	L	H	A	D	L	V	N	G	L	K	N	D	D	Y	A	I	D	F	L	C	T	E	I	C
Template Known Secondary structure		S	S							T	T	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S			T	T	T											T	T							G	G	G			T				S										T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.																.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		149	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	G	I
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions