Job Description P0A794 Confidence 42.07% Date Thu Jan 5 11:05:06 GMT 2012 Rank 259 Aligned Residues 165 % Identity 12% Template c3ktcB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_050048.1) from2 erwinia carotovora atroseptica scri1043 at 1.54 a resolution Resolution 1.54 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.								.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.							.	.	.	70
Predicted Secondary structure																								.	.	.	.	.	.	.												.																														.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.												.																														.	.	.	.	.	.
Query Sequence		L	L	G	V	N	I	D	H	I	A	T	L	R	N	A	R	G	T	A	Y	P	D	.	.	.	.	.	.	.	P	V	Q	A	A	F	I	A	E	Q	A	.	G	A	D	G	I	T	V	H	L	R	E	D	R	R	H	I	T	D	R	D	V	R	I	L	R	Q	T	L	D	.	.	.	.	.	.	T	R	M	N
Query Conservation																								.	.	.	.	.	.	.												.																														.	.	.	.	.	.
Alig confidence								.	.	.														.	.	.	.	.	.	.												.										.	.	.	.																	.	.	.	.	.	.
Template Conservation								.	.	.																																										.	.	.	.
Template Sequence		E	F	G	A	G	L	.	.	.	W	H	F	A	N	Y	I	D	R	Y	A	V	D	G	Y	G	P	A	L	S	T	I	D	Q	I	N	A	A	K	E	V	G	E	L	S	Y	V	D	L	P	Y	.	.	.	.	P	F	T	P	G	V	T	L	S	E	V	K	D	A	L	K	D	A	G	L	K	A	I	G	I	T
Template Known Secondary structure							G	.	.	.	G	G	G	S					S	S		T	T		S	S																S	S									.	.	.	.	S		S	T	T														T
Template Predicted Secondary structure								.	.	.																																										.	.	.	.
Template SS confidence
		8	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		71	.	.	.	.	.																							.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Query Sequence		L	E	M	A	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	A	I	A	V	E	T	K	P	H	F	C	C	L	V	P	E	K	R	Q	E	V	T	T	E	G	G	L	D	V	A	G	Q	R	D	K	M	R	D	A	C	K	R	L	A	D	A	.	.
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																					.	.
Template Conservation																																																											.
Template Sequence		P	E	I	Y	L	Q	K	W	S	R	G	A	F	T	N	P	D	P	A	A	R	A	A	A	F	E	L	X	H	E	S	A	G	I	V	R	E	L	G	A	N	Y	V	K	V	W	P	G	Q	D	G	W	D	Y	P	F	Q	.	V	S	H	K	N	L	W	K	L	A	V	D	G	X	R	D	L	A	G	A	N	P
Template Known Secondary structure				T	T	S	G	G	G	T	T		S	T	T		S	S																						T		S							T	T				S	S	T	T	S	.	S																			T		T
Template Predicted Secondary structure																																																											.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.												.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	Q	V	S	L	F	I	D	A	.	.	.	.	.	.	.	.	.	.	.	D	E	E	Q	I	K	A	A	A	E	V	G	A	P	F	I	E	I	H	T	G	C	Y	A	D	A	K	T	D	A	E	Q	A	Q	E	L	A	R	I	A	K
Query Conservation												.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	K	F	A	I	E	Y	K	P	R	E	P	R	V	K	X	T	W	D	S	A	A	R	T	L	L	G	I	E	D	I	G	L	D	N	V	G	V	L	L	D	F	G	H	A	L	Y	G	G	E	S	P	A	D	S	A	Q	L	I	I	D
Template Known Secondary structure		T	S								S		S	S	S	S			S	S		S												T		T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions