|   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . |  |
|
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|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |
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|
Query SS confidence |   |
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|
| . |
. |
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| . |
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|
Query Sequence |   |
D | P | V | Q | A | A | F | I | A | E | Q | A | G | A | D | G | I | T | V | H | . |
. |
L | R | E | D | R | R | H | I | T | D | R | D | V | R | I | L | R | Q | T | L | D | T | R | M | N | L | E | M | A | . |
V | T | E | E | M | L | A | I | A | V | E | T | K | P | H | F | C | C | L | V | P | E | K | R | Q | E | V | T |
Query Conservation |   |
|   |
|   |
|
|   |   |
|   |   |
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|
| . | . |
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|   |
|   |
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|   |   |
|   |   |   |   |   |   |   |   |
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|
|   |   | . |   |
|   |
|   |
|   |   |
|   |   |   |
|
|   |   |
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|   |
|   |
|   |
|
Alig confidence |   |
|
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|
| . | . |
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| . |
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|
| . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|
|
|   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
S | A | V | D | A | A | L | G | W | Q | R | D | G | A | E | W | I | H | L | V | D | L | D | A | A | F | G | R | G | S | N | H | E | L | L | A | E | V | V | G | K | L | D | V | Q | V | E | L | S | G | G | I | R | D | D | E | S | L | A | A | A | L | A | T | G | C | A | R | V | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
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|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
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  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
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  |
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
|
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|
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
T | E | G | G | L | D | V | A | G | Q | R | D | K | M | R | D | A | C | K | R | L | A | D | A | G | I | Q | V | S | L | F | I | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | D | E | E | Q | I | K | A | A | A | E | V | G | A | P | F | I | E | I | H | T | G | C | Y | A | D | A | K | T |
Query Conservation |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|   |   |
|   |   |   |
|
|
|   |
|
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|   |
|
|   |
|   |   |
Alig confidence |   |
. | . |
|
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| . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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|
|
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|
Template Conservation |   |
. | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
. |
. |
V | G | T | A | A | L | E | N | P | Q | W | C | A | R | V | I | G | E | H | G | D | Q | . |
V | A | V | G | L | D | V | Q | I | I | D | G | E | H | R | L | R | G | R | G | W | E | T | D | G | G | D | L | W | D | V | L | E | R | L | D | S | E | G | C | S | R | F | V | V | T | D | I | T | K | D | G | T | L | G |
Template Known Secondary structure |   |
. | . |  |
| G | G | G | G | G |
|  |  |  |  |  |  |  |  |  |  |  | G | G | G | . |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |
| S | S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  | T | T | T | T | T | S | S | S |
Template Predicted Secondary structure |   |
. | . |  |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|
Template SS confidence |   |
|
|
|
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|
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|
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|
|
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  |   |
|
|
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | |
. | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
  |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
. | . | . | 200 | . | . | . | . | . | . | |
|
. | . | . | 210 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
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|
|
|
|
|
|
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| . |
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|
|
| . |
. |
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|
|
Query Sequence |   |
D | A | E | Q | A | Q | E | L | A | R | I | A | K | A | A | T | F | A | A | S | L | G | L | K | V | N | A | G | H | G | L | T | . |
Y | H | N | V | K | A | I | A | A | I | . |
. |
P | E | M | H | E | L | N | I | G | H | A | I |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|
|   | . |
|   |
|
|   |   |
|
|   |
| . | . |   |   |
|   |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
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| . |
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|
|
|
|
| . | . |
|
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|
|
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|
|
Template Conservation |   |
|   |   |   |
|   | . |
|   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |
|
|
|   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|   |
|
|
Template Sequence |   |
G | P | N | L | D | L | . |
L | A | G | V | A | D | R | . |
. |
. |
. |
. |
. |
T | D | A | P | V | I | A | S | G | G | V | S | S | L | D | D | L | R | A | I | A | T | L | T | H | R | G | V | E | G | A | I | V | G | K | A | L |
Template Known Secondary structure |   |
|
|
|  |  |  | . |  |  |  |  |  | T | T | . | . | . | . | . | . |
| S | S |
|  |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  | T | T | G | G | G | T |  |  |  |  |  |  |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  | . |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
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|
  |   |
180 | . | . | . | . | . | |
. | . | . | . | 190 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
  |