Job Description P0A794 Confidence 56.98% Date Thu Jan 5 11:05:06 GMT 2012 Rank 204 Aligned Residues 186 % Identity 23% Template c2dy3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from corynebacterium glutamicum Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.															.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query SS confidence															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query Sequence		M	A	E	L	L	L	G	V	N	I	D	H	I	.	A	T	L	R	N	A	R	G	T	A	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	V	Q	A	A	F	I	A	E	Q	A	G	A	D	G	I	T	V	H	L	R	E	D	R	R	H	I	T	D	R	D	V	R	I	L	R	Q	T	.
Query Conservation															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Alig confidence															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.													.
Template Conservation																																																													.	.	.	.	.	.	.	.
Template Sequence		M	N	L	L	T	T	K	I	D	L	D	A	I	A	H	N	T	R	V	L	K	Q	M	A	G	P	A	K	L	M	A	V	V	K	A	N	A	Y	N	H	G	V	E	K	V	A	P	V	I	A	A	H	G	A	D	A	F	G	V	.	.	.	.	.	.	.	.	A	T	L	A	E	A	M	Q	L	R	D	I	G
Template Known Secondary structure				S																						T	T	S												T	T											T	T	T							.	.	.	.	.	.	.	.												T	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.									60	.	.	.	.	.	.	.	.	.	70	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		L	D	T	R	M	N	L	E	M	A	V	T	E	E	M	L	A	I	A	V	E	T	K	P	H	F	C	C	L	V	P	E	K	R	Q	E	V	T	T	E	G	G	L	D	V	A	G	Q	R	D	K	M	R	D	A	C	K	R	L	A	D	A	G	I	Q	V	S	L	F	I	D	A	D	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.											.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		I	S	Q	E	V	L	C	W	I	W	T	P	E	Q	D	F	R	A	A	I	D	R	N	I	D	L	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	P	A	H	A	K	A	L	I	E	T	D	A	E	H	.	I	R	V	S	I	K	I	D	S	G	L	H	R	S	G	V	D
Template Known Secondary structure				S									T	T	S							T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S									T				S		.							B			S	S		S	S	S	B
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
						138	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.	.	.	.											.
Query SS confidence		.	.	.	.											.
Query Sequence		.	.	.	.	E	E	Q	I	K	A	A	A	E	V	.	G	A	P	F	I	E	I	H	T	G	C	Y	A	D	A	K	T	D	A	E	Q	A	Q	E	L	A	R	I	A	K	A	A	T	F	A	A	S	L	G	L	K	V	N	A	G	H	G	L	T	Y	H	N	V	K	A	I	A	A	I	P	E	M	H	E	L
Query Conservation		.	.	.	.											.
Alig confidence		.	.	.	.											.										.						.	.	.																																									.
Template Conservation																										.						.	.	.																																									.
Template Sequence		E	Q	E	W	E	G	V	F	S	A	L	A	A	A	P	H	I	E	V	T	G	M	F	T	.	H	L	A	C	A	.	.	.	P	E	T	D	R	Q	I	I	A	F	R	R	A	L	A	L	A	R	K	H	G	L	E	C	P	V	N	H	V	C	N	S	P	A	F	L	T	R	S	D	.	L	H	M	E	M	V
Template Known Secondary structure																T	T									.						.	.	.																				T	T							B								T	T		G	G	.	G		T	T
Template Predicted Secondary structure																										.						.	.	.																																									.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.
		213	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	G	H	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	G	L	A	F
Template Known Secondary structure					G	G	G
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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