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Job DescriptionP0A794
Confidence82.34%DateThu Jan 5 11:05:06 GMT 2012
Rank135Aligned Residues148
% Identity16%Templatec1znnF_
PDB info PDB header:biosynthetic proteinChain: F: PDB Molecule:plp synthase; PDBTitle: structure of the synthase subunit of plp synthase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70..... ....80.........90. .......
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Query Sequence  YPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAV. TEEMLAIAVETKPHFC. . . . CLVPEKR
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Template Sequence  DVVNAEQAKIAEAAGAVAVMALEGGVARMADPTVIEEVMNAVSIPVMAKVRIGHYVEARVLEALGVDYIDESEVLTPADE
Template Known Secondary structure  SSTT
S






S


SS
TT
TT
STTS

S
S
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   24.....30.........40.........50.........60.........70.........80.........90.........100...
 
   99100......... 110..
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Query Sequence  QEVTTEGGLDV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AGQ
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Template Sequence  EFHIDKRQFTVPFVCGCRDLGEAARRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQIRKVVNMSEDELVAEAKQLGAP
Template Known Secondary structure  S



GGG
SS
SSTT
S


TTSS

S
GGGT

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   113......120.........130.........140.........150.........160.........170.........180.........190..
 
   113......120.........130.........140.........150.........160.........170..
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Query Sequence  RDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQEL
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Template Sequence  VEVLREIKRLGRLPVVNFAAGGVTTPADAALMMHLGADGVFVGSGIFKS. ENPEKYARAI
Template Known Secondary structure  TS
SS
SS

STT
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   193......200.........210.........220.........230.........240. ........250.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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