 |
Job Description | P0A794 | Confidence | 38.67% | Date | Thu Jan 5 11:05:06 GMT 2012 |
Rank | 278 | Aligned Residues | 131 |
% Identity | 14% | Template | c1vrdA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:inosine-5'-monophosphate dehydrogenase; |
PDBTitle: crystal structure of inosine-5'-monophosphate dehydrogenase (tm1347)2 from thermotoga maritima at 2.18 a resolution
|
Resolution | 2.18 Å |
|
 |
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | A | Y | P | D | P | V | Q | A | A | F | I | A | E | Q | A | G | A | D | G | I | T | V | H | L | R | E | D | R | R | H | I | T | D | R | D | V | R | I | L | R | Q | T | . |
L | D | T | R | M | N | L | E | M | A | V | T | E | E | M | L | A | I | A | V | E | T | K | P | H | F | C | C | L | V | P | E | K | R | Q | E |
Query Conservation |   |
  |   |   |
|
|   |
|   |
|
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|   |   |   | . |   |   |   |   |   |
|
|
|   |   |   |
|   |
|   |
|   |   |
|   |   |   |
|
|   |   |
|
|
|
|
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |
|   |
|   |
|
|   |   |
Template Sequence |   |
G | T | S | P | E | T | M | E | R | V | E | K | L | V | K | A | G | V | D | V | I | V | I | D | T | A | H | G | H | S | R | R | V | I | E | T | L | E | M | I | K | A | D | Y | P | D | L | P | V | V | A | G | N | V | A | T | P | E | G | T | E | A | L | I | K | A | G | A | D | A | V | K | V | G | V | G | P | G | S | I |
Template Known Secondary structure |   |
| S | S | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
| S |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
| S | S |
| S | T | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 |
  |
  |   |
101 | . | . | . | . | . | . | . | . | |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
|
|
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | T | T | E | G | G | L | D | V | . |
A | G | Q | R | D | K | M | R | D | A | C | K | R | L | A | D | A | G | I | Q | V | S | L | F | I | D | . |
. |
. |
A | D | E | E | Q | I | K | A | A | A | E | V | G | A | P | F | I | E | I |
Query Conservation |   |
  |
|
|
|
|
|
|
|   | . |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
| . | . | . |
|   |   |   |   |
|   |   |
|   |   |   |
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   | . | . |   |
|
|
|
|
|   |
|
|
|   |   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
Template Sequence |   |
C | T | T | R | V | V | A | G | V | G | V | P | Q | L | T | A | V | M | E | C | S | E | V | A | R | K | Y | . |
. |
D | V | P | I | I | A | D | G | G | I | R | Y | S | G | D | I | V | K | A | L | A | A | G | A | E | S | V | M | V |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | T |
|
|  |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
301 | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | |
|
. | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|