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Job DescriptionP0AFU4
Confidence99.74%DateThu Jan 5 11:27:17 GMT 2012
Rank117Aligned Residues260
% Identity17%Templatec1in8A_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:holliday junction dna helicase ruvb; PDBTitle: thermotoga maritima ruvb t158v
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PATDERWREAIVTRSPLMLRLLEQARLV. . . AQSDVSVLINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLE
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Template Sequence  QFLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASEL. . . QTNIHVTSGPVLVKQGDM
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TTS
SSGGG

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T




SSTTSS...T

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Query Sequence  SELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLPK
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Template Sequence  AAI. . . . . . . . . . . . . . . . . LTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQ. . . . . . . IDIQPFTLVGATVRSGLLS
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Query Sequence  AMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVIEQ
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Template Sequence  SPLRSRFG. . . . . . . IILELDFYTVKE. . . . . . . . LKEIIKRAASLMDV. . . EIEDAAAEMIAKR. SRGTPRIAIRLTKR
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Query Sequence  CVALTS. . . SPVISDALVEQALEGENTALPTFVEARNQFELNYLRKLLQITKGN. . . VTHAARMAGRNRTEFYKLLSRH
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Template Sequence  VRDMLTVVKADRINTDIVLKTMEVLNIDDEG. . . . LDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPY
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SSB
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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