117 c1in8A_ Probab=99.74   E-value=2e-15  Score=118.55  Aligned_columns=260  Identities=17%

Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHCC---CCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHH
Q ss_conf             2222121222222111121001221002---3444200025788843899999986317536887003313318976734
Q batch____       126 PATDERWREAIVTRSPLMLRLLEQARLV---AQSDVSVLINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLE  202 (444)
Q Consensus       126 ~~~~~~~~~~lig~S~am~~l~~~i~~~---A~~~~pvli~Ge~GtGK~~~A~~iH~~s~~~~~~f~~v~c~~l~~~~~~  202 (444)
                      .......++.++|.......+...+...   .....+|+|+|++||||+++|++|+...   +.+|+.++|.........
T Consensus         1 ~~~rp~~~~d~iG~e~~~~~L~~~i~~~~~~~~~~~~ill~GppGtGKT~la~~ia~~l---~~~~~~i~~~~~~~~~~~   77 (298)
T c1in8A_           1 QFLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASEL---QTNIHVTSGPVLVKQGDM   77 (298)
T ss_dssp             CTTSCSSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHH---TCCEEEEETTTCCSHHHH
T ss_pred             CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHC---CCCEEEEECCCCCCCHHH
T ss_conf             98889997781270999999999999986338888857998698898889999999970---997999941553320124


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCHHHCCCCEEEEECHHHCCHHHHHHHHHHHHCCCEEECCCCCEECCCEEEEECCCCCHHH
Q ss_conf             44312124666775312246131147986999452378899999999997339476768887301672899427889789
Q batch____       203 SELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLPK  282 (444)
Q Consensus       203 ~~lfg~~~~~~~~~~~~~~g~~~~a~~gtL~l~~i~~l~~~~Q~~Ll~~l~~~~~~~~~~~~~~~~~~rii~~s~~~l~~  282 (444)
                      ...                 ......++++|+|+++.++...|..++..++++.       ......+.++.........
T Consensus        78 ~~~-----------------~~~~~~~~il~~dei~~l~~~~~~~l~~~l~~~~-------~~~~~~~~~~~~~~~~~~~  133 (298)
T c1in8A_          78 AAI-----------------LTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQ-------IDIQPFTLVGATVRSGLLS  133 (298)
T ss_dssp             HHH-----------------HHTCCTTCEEEEETGGGCCHHHHHHHHHHHHHSC-------CCCCCCEEEEEESCGGGSC
T ss_pred             HHH-----------------HHHHCCCCEEEEEEHHHCCHHHHHHHHHHHHCCC-------CCCCEEEECCCCCCHHHCC
T ss_conf             566-----------------8851379989994236769899999999970553-------3444066526545856314


Q ss_pred             HHHCCCCCHHHHHHCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             98858986467852154788504043071428999999999999983669988898999998719989838999999999
Q batch____       283 AMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVIEQ  362 (444)
Q Consensus       283 ~~~~~~f~~~L~~~l~~~~i~iP~LreR~eDi~~L~~~~l~~~~~~~~~~~~~~s~~a~~~L~~~~wpgN~~eL~~~i~~  362 (444)
                      ......|.       ..+.+..|+..+        ...++...+.+.+.   .++.++++.+..+ |+||+|++.+++++
T Consensus       134 ~~~~~~~~-------~~~~~~~~~~~~--------~~~~~~~~~~~~~~---~~~~~~~~~i~~~-~~g~~R~~~~ll~~  194 (298)
T c1in8A_         134 SPLRSRFG-------IILELDFYTVKE--------LKEIIKRAASLMDV---EIEDAAAEMIAKR-SRGTPRIAIRLTKR  194 (298)
T ss_dssp             HHHHTTCS-------EEEECCCCCHHH--------HHHHHHHHHHHTTC---CBCHHHHHHHHHT-STTCHHHHHHHHHH
T ss_pred             CHHHHHHH-------HHCCCCCCCHHH--------HHHHHHHHHHHCCC---CCCHHHHHHHHHH-CCCCHHHHHHHHHH
T ss_conf             64332344-------311367898999--------99999999998298---5588999999998-39998999999999


Q ss_pred             HHHHCC---CCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHCCCHHHHHHHHHHC
Q ss_conf             998638---982478780243125666679989999999999999999982987---7899988489989999999980
Q batch____       363 CVALTS---SPVISDALVEQALEGENTALPTFVEARNQFELNYLRKLLQITKGN---VTHAARMAGRNRTEFYKLLSRH  435 (444)
Q Consensus       363 ~~~~~~---~~~i~~~~l~~~~~~~~~~~~~~~~~l~~~Er~~i~~al~~~~gn---~~~aA~~LGisR~tL~rklk~~  435 (444)
                      ++..+.   .+.|+.+++...+.........    ..+.+++.+...+...+++   ....|+.||++.+++..+++.|
T Consensus       195 ~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~ia~~l~~~~~~~~~~~~~~  269 (298)
T c1in8A_         195 VRDMLTVVKADRINTDIVLKTMEVLNIDDEG----LDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPY  269 (298)
T ss_dssp             HHHHHHHHTCSSBCHHHHHHHHHHHTCCTTC----CCHHHHHHHHHHHHHSTTCCBCHHHHHHHHTSCHHHHHHTTHHH
T ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHCCCCHH----HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             9999985298876989999999751255101----11468999999999817695479999998599989999997657