Job Description P32056 Confidence 97.32% Date Thu Jan 5 11:49:03 GMT 2012 Rank 83 Aligned Residues 76 % Identity 17% Template c3p5tE_ PDB info PDB header:rna binding protein Chain: E: PDB Molecule:cleavage and polyadenylation specificity factor subunit 5; PDBTitle: cfim25-cfim68 complex Resolution 2.70 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	S	L	D	F	I	V	E	N	S	R	G	E	F	L	L	G	K	R	T	N	R	P	A	Q	G	Y	W	F	V	P	G	G	R	V	Q	K	D	E	T	L	E	A	A	F	E	R	L	T	M	A	E	L	G	L	R	L	P	I	T	A	G	Q	F	Y	G	V	W	Q	H	F	Y	D	D	N	F	S	G	T
Query Conservation
Alig confidence																							.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence		V	E	G	V	L	I	V	H	E	H	R	L	P	H	V	L	L	L	Q	L	G	.	.	.	.	T	T	F	F	K	L	P	G	G	E	L	N	P	G	E	D	E	V	E	G	L	K	R	L	M	T	E	I	L	G	V	L	Q	D	W	V	I	D	D	C	I	G	N	W	W	R	P	N	F	E	P	P	Q	Y	P
Template Known Secondary structure											T	T										T	.	.	.	.	T	T					S						T	T																																		S	S	S	S			B	S
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions