Return to main results Retrieve Phyre Job Id

Job DescriptionP32056
Confidence99.90%DateThu Jan 5 11:49:03 GMT 2012
Rank15Aligned Residues133
% Identity21%Templatec3n77B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:nucleoside triphosphatase nudi; PDBTitle: crystal structure of idp01880, putative ntp pyrophosphohydrolase of2 salmonella typhimurium lt2
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30........ .40.........50.........60.........70.........80.........90..
Predicted Secondary structure 








..

















Query SS confidence 























. .





















































Query Sequence  TPLVSLDFIVENSRGEFLLGKRTN. . RPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDN
Query Conservation   
 
 
  

    
 


  
  ..    
 
 



 

 


   

 


 




 
                  
Alig confidence 























..





















































Template Conservation 
    

  

   
 


  
        
 
  


 

 


   

 


 

 

                    
Template Sequence  MRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRIKT
Template Known Secondary structure 
TT
TTSTTTTT





TT


TT

Template Predicted Secondary structure 



























Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   93......100.........110.........120.........130.........140........
Predicted Secondary structure 
























Query SS confidence 























































Query Sequence  FSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLASDNVHANSRAYF
Query Conservation                               
     
    

          
  
Alig confidence 














































.







Template Conservation                               
     
    

    
.    
  
Template Sequence  YADGRQEEIYMIYLIFDCVSANRDICINDEFQDYAWVAPAALALYDL. NVATRHTL
Template Known Secondary structure 
TTS
S






TT
GGGGGGS
B.
Template Predicted Secondary structure 























.



Template SS confidence 























































   81........90.........100.........110.........120....... ..130.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions