Job Description P32056 Confidence 99.93% Date Thu Jan 5 11:49:03 GMT 2012 Rank 2 Aligned Residues 135 % Identity 19% Template c3gz8C_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:mutt/nudix family protein; PDBTitle: cocrystal structure of nudix domain of shewanella oneidensis2 nrtr complexed with adp ribose Resolution 2.43 Å

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		3	.	.	.	.	.	.	10	.	.	.	.					.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure														.	.	.	.											.	.	.																															.	.
Query SS confidence														.	.	.	.											.	.	.																															.	.
Query Sequence		L	R	Q	E	D	F	A	T	V	V	R	S	.	.	.	.	T	P	L	V	S	L	D	F	I	V	.	.	.	E	N	S	R	G	E	F	L	L	G	K	R	T	N	R	P	A	Q	G	Y	W	F	V	P	G	G	R	V	Q	K	.	.	D	E	T	L	E	A	A	F	E	R	L	T	M	A	E	L	G	L	R
Query Conservation														.	.	.	.											.	.	.																															.	.
Alig confidence														.	.	.	.											.	.	.																															.	.
Template Conservation
Template Sequence		M	T	E	A	E	Y	L	A	N	Y	D	P	K	A	F	K	A	Q	L	L	T	V	D	A	V	L	F	T	Y	H	D	Q	Q	L	K	V	L	L	V	Q	R	S	N	H	P	F	L	G	L	W	G	L	P	G	G	F	I	D	E	T	C	D	E	S	L	E	Q	T	V	L	R	K	L	A	E	K	T	A	V	V
Template Known Secondary structure										T			G	G	G	S																T	T										S	S	S	S	S	T	T											T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	I	T	A	G	Q	F	Y	G	V	W	Q	H	F	Y	D	D	N	F	S	G	T	D	F	T	T	H	Y	V	V	L	G	F	R	F	R	V	S	E	E	E	L	L	L	P	D	E	Q	H	D	D	Y	R	W	L	T	S	D	A	L	L	A	S	D	N	V	H	A	N	S	R
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.
Template Sequence		P	P	Y	I	E	Q	L	C	T	V	G	N	.	.	.	.	.	.	.	.	N	S	R	D	A	R	G	W	S	V	T	V	C	Y	T	A	L	M	S	Y	Q	A	C	Q	I	Q	I	A	S	V	S	D	V	K	W	W	P	L	A	D	V	L	Q	M	P	L	A	F	D	H	L	Q
Template Known Secondary structure			S											.	.	.	.	.	.	.	.	S	S	S		T	T	S	S																			S	T	T													T	T	S		B	S	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions