Job Description P32056 Confidence 99.50% Date Thu Jan 5 11:49:03 GMT 2012 Rank 77 Aligned Residues 117 % Identity 14% Template c2j8qB_ PDB info PDB header:nuclear protein Chain: B: PDB Molecule:cleavage and polyadenylation specificity factor 5; PDBTitle: crystal structure of human cleavage and polyadenylation2 specificity factor 5 (cpsf5) in complex with a sulphate3 ion. Resolution 2.3 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		R	S	T	P	L	V	S	L	D	F	I	V	E	N	S	R	G	E	.	.	F	L	L	G	K	R	T	N	R	P	A	Q	G	Y	W	F	V	P	G	G	R	V	Q	K	D	E	T	L	E	A	A	F	E	R	L	T	M	A	E	L	G	L	R	L	P	I	T	A	G	Q	F	Y	G	V	W	Q	H	F	Y	D
Query Conservation																				.	.
Alig confidence																				.	.								.	.	.	.
Template Conservation																													.	.	.	.
Template Sequence		I	G	M	R	R	T	V	E	G	V	L	I	V	H	E	H	R	L	P	H	V	L	L	L	Q	L	G	.	.	.	.	T	T	F	F	K	L	P	G	G	E	L	N	P	G	E	D	E	V	E	G	L	K	R	L	M	T	E	I	L	G	R	Q	D	D	W	V	I	D	D	C	I	G	N	W	W	R	P	N	F
Template Known Secondary structure		T		S												S	S	S										S	.	.	.	.	T	T					S						T	T																																		S	S
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		91	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		D	N	F	S	G	.	.	.	.	.	T	D	F	T	T	H	Y	V	V	L	G	F	R	F	R	V	S	E	E	E	L	L	L	P	D	E	Q	H	D	D	Y	R	W	L	T	S	D	A	L
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.																					.
Template Conservation																																.
Template Sequence		E	P	P	Q	Y	P	Y	I	P	A	H	I	T	K	P	K	E	H	K	K	L	F	L	V	Q	L	Q	E	K	A	.	L	F	A	V	P	K	N	Y	K	L	V	A	A	P	L	F	E	L
Template Known Secondary structure		S	S			B	S	S			T	T		S			S												S	S		.						T	T
Template Predicted Secondary structure																																.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions