Job Description P0AA97 Confidence 5.47% Date Wed Jan 25 15:20:21 GMT 2012 Rank 35 Aligned Residues 60 % Identity 18% Template c3gztF_ PDB info PDB header:virus Chain: F: PDB Molecule:outer capsid glycoprotein vp7; PDBTitle: vp7 recoated rotavirus dlp Resolution 3.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	R	N	Q	F	L	D	A	S	L	T	L	A	R	H	P	S	E	T	Q	E	R	M	M	L	R	L	L	A	W	L	K	Y	A	D	E	R	L	Q	F	T	R	G	L	C	A	D	D	E	P	E	A	W	L	R	N	D	H	L	G	I	D	L	W	I	E	L	G
Query Conservation
Alig confidence																		.																		.	.	.	.	.	.	.	.
Template Conservation																		.																		.	.	.	.	.	.	.	.
Template Sequence		V	D	P	Q	L	Y	C	D	Y	N	V	V	L	M	K	Y	.	D	A	T	L	Q	L	D	M	S	E	L	A	D	L	I	L	N	.	.	.	.	.	.	.	.	E	W	L	C	N	P	M	D	I	T	L	Y	Y	Y	Q	Q	T	D	E	A	N	K	W	I	S	M	G
Template Known Secondary structure			S					S	S									.		S	S	S												S	B	.	.	.	.	.	.	.	.									T	T	T			B				S	T	T
Template Predicted Secondary structure																		.																		.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.									.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions