Job Description P0AA97 Confidence 3.37% Date Wed Jan 25 15:20:21 GMT 2012 Rank 66 Aligned Residues 56 % Identity 32% Template c3g8qA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:predicted rna-binding protein, contains thump PDBTitle: a cytidine deaminase edits c-to-u in transfer rnas in2 archaea Resolution 2.40 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	S	L	T	L	A	R	H	P	S	E	T	Q	E	R	M	M	L	R	L	L	A	W	L	K	Y	A	D	E	R	L	Q	F	T	R	G	L	C	A	D	D	E	P	E	A	W	L	R	N	D	H	L	G	I	D	L	W	I	E	L	G	L	P	D	E
Query Conservation
Alig confidence																							.	.						.	.	.	.	.	.												.	.
Template Conservation																							.	.						.	.	.	.	.	.												.	.
Template Sequence		D	V	L	L	T	F	G	G	N	P	Y	L	T	E	E	D	V	A	A	R	V	.	.	Y	C	L	L	T	.	.	.	.	.	.	G	R	G	F	D	A	D	I	A	P	A	.	.	P	E	N	L	S	G	R	V	E	I	M	V	T	R	G	D	P	D	E
Template Known Secondary structure		S							S		S	S											.	.						.	.	.	.	.	.		T	T								S	.	.	G	G	G		T	T									S
Template Predicted Secondary structure																							.	.						.	.	.	.	.	.												.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions