Job Description P15254 Confidence 98.86% Date Thu Jan 5 11:34:41 GMT 2012 Rank 56 Aligned Residues 197 % Identity 19% Template d1vcoa1 SCOP info Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) Resolution 2.15

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1041	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.							.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		K	V	A	V	L	R	E	Q	G	V	N	S	H	V	E	M	A	A	A	F	H	R	A	G	F	.	.	.	.	.	.	D	A	I	D	V	H	M	S	D	L	L	T	G	R	T	G	L	E	D	F	H	A	L	V	A	C	G	G	F	S	Y	G	D	V	L	G	A	G	E	G	W	A	K	S	I	L	F	N	D
Query Conservation																											.	.	.	.	.	.
Alig confidence						.																					.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	A	I	.	A	G	K	Y	V	D	A	Y	L	S	L	L	E	A	L	R	H	A	G	I	K	N	R	A	R	V	E	V	K	W	V	D	A	E	S	L	A	D	L	E	E	A	F	R	D	V	S	G	I	L	V	P	G	G	F	G	V	R	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E
Template Known Secondary structure						.			S				T	T														T	T										G	G	G								T	T	T		S									S	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		302	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.															.
		1115	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.																		.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	R	D	E	F	A	T	F	F	H	R	P	Q	T	L	A	L	G	V	C	N	G	C	Q	M	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	R	E	L	I	P	G	S	E	L	W	P	R	F	V	R	N	T	S	D	R	F	E	A	R	F	S	L	V	E	V	T	Q	S
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation														.																																																																	.
Template Sequence		G	K	V	R	A	A	Q	Y	A	R	E	R	.	K	I	P	Y	L	G	I	C	L	G	L	Q	I	A	V	I	E	F	A	R	N	V	A	G	L	K	G	A	N	S	T	E	F	D	P	H	T	P	H	P	V	I	D	L	M	P	E	Q	L	E	V	G	G	T	M	R	L	G	D	W	P	M	R	I	.	K	P
Template Known Secondary structure													T	.	T							T														T	S			T	T				T	T	T		T	T		S							S		G	G	G																.		T
Template Predicted Secondary structure														.																																																																	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.		.	.
		1178	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		P	S	L	L	L	Q	G	M	V	G	S	Q	M	P	I	A	V	S	H	G	E	G	R	V	E	V	R	D	A	A	H	L	A	A	L	E	S	K	G	L	V	A	L	R	Y	V	D	N	F	G	K	V	T	E	T	Y	P	A	N	P	N	G	S	P	N	G	I	T	A	V	T	T	E	S	G	R	V	T	.	I
Query Conservation																																																																																.
Alig confidence																								.	.	.	.																	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation																								.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	L	L	H	R	L	Y	G	K	E	E	V	L	E	R	H	R	H	R	Y	E	.	.	.	.	V	N	P	L	Y	V	D	G	L	E	R	A	G	L	V	V	.	.	.	.	.	.	.	.	.	.	S	A	T	T	P	G	M	R	G	R	G	A	G	L	V	E	A	I	E	L	K	D	H	P	F	F	L	G
Template Known Secondary structure		T	S									S									S			.	.	.	.													T				.	.	.	.	.	.	.	.	.	.							B	T	T	B	S	T	T								T	T	S	S	S
Template Predicted Secondary structure																								.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.					.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490											.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
		1257	.	.	1260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	P	H	P	E	R	V	F	R	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	S	H	P	E	F	K	S	R	P	M
Template Known Secondary structure			S	S		G	G	G	G		B	T	T
Template Predicted Secondary structure
Template SS confidence
		519	520	.	.	.	.	.	.	.	.	.	530

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions