Job Description P15254 Confidence 97.76% Date Thu Jan 5 11:34:41 GMT 2012 Rank 88 Aligned Residues 94 % Identity 18% Template c3uk7B_ PDB info PDB header:transferase Chain: B: PDB Molecule:class i glutamine amidotransferase-like domain-containing PDBTitle: crystal structure of arabidopsis thaliana dj-1d Resolution 2.05 Å

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		1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.				.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.																															.	.	.	.	.	.	1080	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	K	V	A	V	L	R	E	Q	G	V	N	S	H	V	E	M	A	.	.	.	A	A	F	H	R	A	G	F	D	A	I	D	V	H	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	L	T	G	R	T	G	L	E	D	F	H
Query Conservation																				.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.								.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		K	R	I	L	F	L	C	G	D	Y	.	X	E	D	Y	E	V	K	V	P	F	Q	S	L	Q	A	L	G	C	Q	V	D	A	V	C	P	E	K	K	A	G	D	R	C	P	T	A	I	H	D	F	E	G	D	Q	T	Y	S	E	K	P	G	H	T	F	A	L	T	T	N	F	D	D	L	V	S	S	S	Y	D
Template Known Secondary structure										T	T	.																	T								T	T			T	T												S	S	S	S													S		T	T	T			G	G	G		S
Template Predicted Secondary structure												.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		1087	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	A	C	G	G	F	S	Y	G	D	V	L	G	A	G	E	G	W	A	K	S	I	L	F	N	D	R	V	R	D	E	F	A	T	F	F	H	R	P	Q	T	L	A	L	G	V	C	N	G	C	Q	M	M	S	N	L	R	E	L
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																					.									.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.																					.									.
Template Sequence		A	L	V	I	P	G	G	R	A	.	.	.	.	.	.	.	.	.	.	.	P	E	Y	L	A	L	N	E	H	V	L	N	I	V	K	E	F	X	N	S	.	E	K	P	V	A	S	I	H	.	G	Q	Q	I	L	A	A	A	G	V	L
Template Known Secondary structure								B	S		.	.	.	.	.	.	.	.	.	.	.					T	T														T	.	T								.	T							T	T	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																					.									.
Template SS confidence
		277	.	.	280	.	.	.	.	.												.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions