Job Description P15254 Confidence 97.60% Date Thu Jan 5 11:34:41 GMT 2012 Rank 91 Aligned Residues 96 % Identity 21% Template c3ot1B_ PDB info PDB header:structural genomics Chain: B: PDB Molecule:4-methyl-5(b-hydroxyethyl)-thiazole monophosphate PDBTitle: crystal structure of vc2308 protein Resolution 1.16 Å

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		1041	.	.	.	.	.	.	.	.	1050	.			.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.																.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.
Predicted Secondary structure													.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	A	V	L	R	E	Q	G	V	N	.	.	S	H	V	E	M	A	A	A	F	H	R	A	G	F	D	A	I	D	V	H	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	L	L	T	G	R	T	G	L	E	D	F	H	A	L	V	A	C	G	G	F	S	Y	G	D	V	L	G	A	G
Query Conservation													.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	L	V	P	V	A	H	G	S	E	E	X	E	T	V	I	I	V	D	T	L	V	R	A	G	F	Q	V	T	X	A	A	V	G	D	K	L	Q	V	Q	G	S	R	G	V	W	L	T	A	E	Q	T	L	E	A	C	S	A	E	A	F	D	A	L	A	L	P	G	.	.	.	.	.	.	.	.	.	.	G
Template Known Secondary structure									T	T																T	T								S	S	S		S					T	T	S						S			G	G	G			G	G	G		S							.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.											.
		1104	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	W	A	K	S	I	L	F	N	D	R	V	R	D	E	F	A	T	F	F	H	R	P	Q	T	L	A	L	G	V	C	N	G	C	Q	M	M	S	N	L	R	E	L
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		V	G	G	A	Q	A	F	A	D	S	T	A	L	L	A	L	I	D	A	F	S	Q	Q	.	G	K	L	V	A	A	I	A	T	P	A	L	V	F	A	K	Q	Q	K	F
Template Known Secondary structure										T														T	.	T												T	T	T	T	T	T		S
Template Predicted Secondary structure																									.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions