Job Description P15254 Confidence 98.57% Date Thu Jan 5 11:34:41 GMT 2012 Rank 70 Aligned Residues 177 % Identity 20% Template c3nvaB_ PDB info PDB header:ligase Chain: B: PDB Molecule:ctp synthase; PDBTitle: dimeric form of ctp synthase from sulfolobus solfataricus Resolution 2.50 Å

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		1055	.	.	.	.	1060	.	.	.	.	.							.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.					.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.																	.	.	.	.
Query SS confidence													.	.	.	.	.	.																	.	.	.	.
Query Sequence		E	M	A	A	A	F	H	R	A	G	F	.	.	.	.	.	.	D	A	I	D	V	H	M	S	D	L	L	T	G	R	T	G	.	.	.	.	L	E	D	F	H	A	L	V	A	C	G	G	F	S	Y	G	D	V	L	G	A	G	E	G	W	A	K	S	I	L	F	N	D	R	V	R	D	E	F	A	T	F	F
Query Conservation													.	.	.	.	.	.																	.	.	.	.
Alig confidence													.	.	.	.	.	.																	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	K	E	A	I	Y	H	A	S	A	Y	I	G	V	R	P	K	L	I	W	I	E	S	T	D	L	E	S	D	T	K	N	L	N	E	I	L	G	N	V	N	G	I	I	V	L	P	G	F	G	S	R	G	A	E	G	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	I	K	Y	A
Template Known Secondary structure														T	T										G	G	G	G			S	S	S			T	T	T	S	S	S		S						S			S	S	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.																370	.	.	.	.	.
		1125	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.							.	.	.	.	.	.	1150		.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.														.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.								.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.								.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	R	P	Q	T	L	A	L	G	V	C	N	G	C	Q	M	M	S	N	.	.	.	.	.	.	L	R	E	L	I	P	G	.	S	E	L	W	P	R	F	V	R	N	T	S	D	R	F	E	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	L	V	E	V	T	Q	S	P	S	L	L	L	Q	G
Query Conservation																					.	.	.	.	.	.								.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.								.																			.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																																																																								.
Template Sequence		R	E	H	N	I	P	F	L	G	I	C	F	G	F	Q	L	S	I	V	E	F	A	R	D	V	L	G	L	S	E	A	N	S	T	E	I	N	P	N	T	K	D	P	V	I	T	L	L	D	E	Q	K	N	V	T	Q	L	G	G	T	M	R	L	G	A	Q	K	I	I	L	.	K	E	G	T	I	A	Y	Q	L
Template Known Secondary structure				T	T							T														T	T			T	T				T	T	T		T	T		S							B		T	T	S		B		S	S														.		T	T	S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.		.	.	.	.	450	.	.	.	.
		1185	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.		.	.	.	.	.	.	1260	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		M	V	G	S	Q	M	P	I	A	V	S	H	G	E	G	R	V	E	V	R	D	A	A	H	L	A	A	L	E	S	K	G	L	V	A	L	R	Y	V	D	N	F	G	K	V	T	E	T	Y	P	A	N	P	N	G	S	P	N	G	I	T	A	V	T	T	E	S	G	R	.	V	T	I	M	M	P	H	P	E	R
Query Conservation																																																																							.
Alig confidence														.	.	.			.																				.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.											.
Template Conservation														.	.	.			.																				.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template Sequence		Y	G	K	K	V	V	Y	E	R	H	R	H	.	.	.	R	Y	.	E	V	N	P	K	Y	V	D	I	L	E	D	A	G	L	V	V	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	E	N	G	L	.	.	.	V	E	I	I	E	L	P	S	N	K	F	F	V	A	T	Q	A	H	P	E	F
Template Known Secondary structure			T	S	S									.	.	.			.													T	T						.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S		.	.	.							T	T	S	S	S					S	S		G	G	G
Template Predicted Secondary structure														.	.	.			.																				.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template SS confidence
		455	.	.	.	.	460	.	.	.	.	.	.				.	.		.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.														.	.	490	.	.	.				.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
		1264	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	R	P
Template Known Secondary structure		G		B	T
Template Predicted Secondary structure
Template SS confidence
		515	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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